Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FntaQ61239 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
FntaQ61239 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
FntaQ61239 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
FntaQ61239 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
FntaQ61239 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.59■■□□□ 1.53
FntaQ61239 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
FntaQ61239 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
FntaQ61239 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.58■■□□□ 1.53
FntaQ61239 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
FntaQ61239 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
FntaQ61239 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
FntaQ61239 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
FntaQ61239 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
FntaQ61239 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
FntaQ61239 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
FntaQ61239 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
FntaQ61239 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
FntaQ61239 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.56■■□□□ 1.52
FntaQ61239 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
FntaQ61239 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.55■■□□□ 1.52
FntaQ61239 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.55■■□□□ 1.52
FntaQ61239 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.55■■□□□ 1.52
FntaQ61239 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
FntaQ61239 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
FntaQ61239 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
FntaQ61239 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
FntaQ61239 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
FntaQ61239 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.53■■□□□ 1.52
FntaQ61239 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
FntaQ61239 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
FntaQ61239 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
FntaQ61239 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
FntaQ61239 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
FntaQ61239 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.52■■□□□ 1.52
FntaQ61239 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.52■■□□□ 1.52
FntaQ61239 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
FntaQ61239 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
FntaQ61239 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.51■■□□□ 1.51
FntaQ61239 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
FntaQ61239 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
FntaQ61239 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.5■■□□□ 1.51
FntaQ61239 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
FntaQ61239 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
FntaQ61239 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
FntaQ61239 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
FntaQ61239 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
FntaQ61239 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
FntaQ61239 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
FntaQ61239 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
FntaQ61239 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FntaQ61239 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FntaQ61239 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
FntaQ61239 Zfp131-205ENSMUST00000223812 663 ntBASIC24.47■■□□□ 1.51
FntaQ61239 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
FntaQ61239 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
FntaQ61239 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FntaQ61239 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FntaQ61239 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FntaQ61239 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
FntaQ61239 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
FntaQ61239 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
FntaQ61239 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
FntaQ61239 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
FntaQ61239 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
FntaQ61239 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
FntaQ61239 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
FntaQ61239 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
FntaQ61239 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
FntaQ61239 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
FntaQ61239 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.43■■□□□ 1.5
FntaQ61239 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FntaQ61239 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
FntaQ61239 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
FntaQ61239 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.42■■□□□ 1.5
FntaQ61239 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.42■■□□□ 1.5
FntaQ61239 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.41■■□□□ 1.5
FntaQ61239 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
FntaQ61239 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
FntaQ61239 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.4■■□□□ 1.5
FntaQ61239 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
FntaQ61239 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
FntaQ61239 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.39■■□□□ 1.49
FntaQ61239 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.39■■□□□ 1.49
FntaQ61239 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
FntaQ61239 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
FntaQ61239 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
FntaQ61239 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
FntaQ61239 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
FntaQ61239 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.36■■□□□ 1.49
FntaQ61239 Gm24970-201ENSMUST00000175582 82 ntBASIC24.36■■□□□ 1.49
FntaQ61239 Gm9397-201ENSMUST00000200125 605 ntBASIC24.36■■□□□ 1.49
FntaQ61239 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
FntaQ61239 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
FntaQ61239 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
FntaQ61239 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
FntaQ61239 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.35■■□□□ 1.49
FntaQ61239 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
FntaQ61239 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
FntaQ61239 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 129.2 ms