Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clns1aQ61189 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clns1aQ61189 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clns1aQ61189 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clns1aQ61189 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Clns1aQ61189 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clns1aQ61189 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clns1aQ61189 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Clns1aQ61189 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Clns1aQ61189 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clns1aQ61189 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clns1aQ61189 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Clns1aQ61189 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clns1aQ61189 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clns1aQ61189 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Clns1aQ61189 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Clns1aQ61189 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.74■□□□□ 0.75
Clns1aQ61189 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Clns1aQ61189 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clns1aQ61189 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clns1aQ61189 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clns1aQ61189 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clns1aQ61189 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Clns1aQ61189 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clns1aQ61189 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Clns1aQ61189 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clns1aQ61189 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clns1aQ61189 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.71■□□□□ 0.75
Clns1aQ61189 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clns1aQ61189 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clns1aQ61189 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Clns1aQ61189 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Clns1aQ61189 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clns1aQ61189 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clns1aQ61189 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clns1aQ61189 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.69■□□□□ 0.74
Clns1aQ61189 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clns1aQ61189 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clns1aQ61189 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clns1aQ61189 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clns1aQ61189 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clns1aQ61189 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Clns1aQ61189 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clns1aQ61189 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clns1aQ61189 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clns1aQ61189 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clns1aQ61189 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clns1aQ61189 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clns1aQ61189 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clns1aQ61189 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clns1aQ61189 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clns1aQ61189 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clns1aQ61189 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.66■□□□□ 0.74
Clns1aQ61189 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clns1aQ61189 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clns1aQ61189 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clns1aQ61189 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clns1aQ61189 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clns1aQ61189 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clns1aQ61189 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clns1aQ61189 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clns1aQ61189 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clns1aQ61189 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clns1aQ61189 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clns1aQ61189 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Clns1aQ61189 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.63■□□□□ 0.73
Clns1aQ61189 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clns1aQ61189 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clns1aQ61189 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clns1aQ61189 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clns1aQ61189 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clns1aQ61189 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clns1aQ61189 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clns1aQ61189 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clns1aQ61189 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Clns1aQ61189 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Clns1aQ61189 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Clns1aQ61189 Gm16148-201ENSMUST00000119653 893 ntBASIC19.6■□□□□ 0.73
Clns1aQ61189 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Clns1aQ61189 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Clns1aQ61189 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clns1aQ61189 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clns1aQ61189 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clns1aQ61189 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clns1aQ61189 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clns1aQ61189 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Clns1aQ61189 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clns1aQ61189 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.59■□□□□ 0.73
Clns1aQ61189 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clns1aQ61189 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clns1aQ61189 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clns1aQ61189 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.59■□□□□ 0.73
Clns1aQ61189 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Clns1aQ61189 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clns1aQ61189 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clns1aQ61189 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clns1aQ61189 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clns1aQ61189 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Clns1aQ61189 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clns1aQ61189 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms