Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf43Q5NCP0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf43Q5NCP0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf43Q5NCP0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf43Q5NCP0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rnf43Q5NCP0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.93■■□□□ 1.42
Rnf43Q5NCP0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rnf43Q5NCP0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf43Q5NCP0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf43Q5NCP0 Gm27502-201ENSMUST00000183495 199 ntBASIC23.92■■□□□ 1.42
Rnf43Q5NCP0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Rnf43Q5NCP0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rnf43Q5NCP0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rnf43Q5NCP0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.9■■□□□ 1.42
Rnf43Q5NCP0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.9■■□□□ 1.42
Rnf43Q5NCP0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf43Q5NCP0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf43Q5NCP0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rnf43Q5NCP0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.89■■□□□ 1.41
Rnf43Q5NCP0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Rnf43Q5NCP0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Rnf43Q5NCP0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf43Q5NCP0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf43Q5NCP0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rnf43Q5NCP0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rnf43Q5NCP0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rnf43Q5NCP0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rnf43Q5NCP0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rnf43Q5NCP0 Gm14523-201ENSMUST00000117260 558 ntBASIC23.86■■□□□ 1.41
Rnf43Q5NCP0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.86■■□□□ 1.41
Rnf43Q5NCP0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rnf43Q5NCP0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rnf43Q5NCP0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.85■■□□□ 1.41
Rnf43Q5NCP0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rnf43Q5NCP0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rnf43Q5NCP0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Rnf43Q5NCP0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.83■■□□□ 1.41
Rnf43Q5NCP0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf43Q5NCP0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf43Q5NCP0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rnf43Q5NCP0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf43Q5NCP0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf43Q5NCP0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Rnf43Q5NCP0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.82■■□□□ 1.4
Rnf43Q5NCP0 Gm9812-201ENSMUST00000061934 968 ntBASIC23.82■■□□□ 1.4
Rnf43Q5NCP0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rnf43Q5NCP0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rnf43Q5NCP0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf43Q5NCP0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.8■■□□□ 1.4
Rnf43Q5NCP0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.8■■□□□ 1.4
Rnf43Q5NCP0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rnf43Q5NCP0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf43Q5NCP0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
Rnf43Q5NCP0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Rnf43Q5NCP0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf43Q5NCP0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rnf43Q5NCP0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Rnf43Q5NCP0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Rnf43Q5NCP0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf43Q5NCP0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rnf43Q5NCP0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.77■■□□□ 1.4
Rnf43Q5NCP0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.76■■□□□ 1.39
Rnf43Q5NCP0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf43Q5NCP0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf43Q5NCP0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf43Q5NCP0 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.76■■□□□ 1.39
Rnf43Q5NCP0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rnf43Q5NCP0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rnf43Q5NCP0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rnf43Q5NCP0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Rnf43Q5NCP0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rnf43Q5NCP0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf43Q5NCP0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf43Q5NCP0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Rnf43Q5NCP0 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.74■■□□□ 1.39
Rnf43Q5NCP0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Rnf43Q5NCP0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf43Q5NCP0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.73■■□□□ 1.39
Rnf43Q5NCP0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf43Q5NCP0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf43Q5NCP0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf43Q5NCP0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf43Q5NCP0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf43Q5NCP0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.71■■□□□ 1.39
Rnf43Q5NCP0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rnf43Q5NCP0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.7■■□□□ 1.38
Rnf43Q5NCP0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Rnf43Q5NCP0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Rnf43Q5NCP0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf43Q5NCP0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf43Q5NCP0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.68■■□□□ 1.38
Rnf43Q5NCP0 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.68■■□□□ 1.38
Rnf43Q5NCP0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf43Q5NCP0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Rnf43Q5NCP0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Rnf43Q5NCP0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
Rnf43Q5NCP0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf43Q5NCP0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.66■■□□□ 1.38
Rnf43Q5NCP0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rnf43Q5NCP0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms