Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC14,76□□□□□ -0,05
Herc2Q4U2R1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14,76□□□□□ -0,05
Herc2Q4U2R1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14,76□□□□□ -0,05
Herc2Q4U2R1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC14,75□□□□□ -0,05
Herc2Q4U2R1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14,75□□□□□ -0,05
Herc2Q4U2R1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC14,75□□□□□ -0,05
Herc2Q4U2R1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14,74□□□□□ -0,05
Herc2Q4U2R1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14,74□□□□□ -0,05
Herc2Q4U2R1 Gm30023-201ENSMUST00000197970 889 ntBASIC14,74□□□□□ -0,05
Herc2Q4U2R1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC14,74□□□□□ -0,05
Herc2Q4U2R1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14,73□□□□□ -0,05
Herc2Q4U2R1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC14,72□□□□□ -0,05
Herc2Q4U2R1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC14,72□□□□□ -0,05
Herc2Q4U2R1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14,72□□□□□ -0,05
Herc2Q4U2R1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14,71□□□□□ -0,05
Herc2Q4U2R1 Gm12818-201ENSMUST00000117562 1349 ntBASIC14,71□□□□□ -0,05
Herc2Q4U2R1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC14,71□□□□□ -0,05
Herc2Q4U2R1 Gm13889-201ENSMUST00000099689 1386 ntBASIC14,71□□□□□ -0,05
Herc2Q4U2R1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14,71□□□□□ -0,05
Herc2Q4U2R1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14,71□□□□□ -0,05
Herc2Q4U2R1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC14,71□□□□□ -0,06
Herc2Q4U2R1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14,71□□□□□ -0,06
Herc2Q4U2R1 Gm45444-201ENSMUST00000211394 898 ntBASIC14,71□□□□□ -0,06
Herc2Q4U2R1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14,71□□□□□ -0,06
Herc2Q4U2R1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14,7□□□□□ -0,06
Herc2Q4U2R1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC14,7□□□□□ -0,06
Herc2Q4U2R1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14,7□□□□□ -0,06
Herc2Q4U2R1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC14,7□□□□□ -0,06
Herc2Q4U2R1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14,7□□□□□ -0,06
Herc2Q4U2R1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14,69□□□□□ -0,06
Herc2Q4U2R1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14,69□□□□□ -0,06
Herc2Q4U2R1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14,69□□□□□ -0,06
Herc2Q4U2R1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14,69□□□□□ -0,06
Herc2Q4U2R1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC14,69□□□□□ -0,06
Herc2Q4U2R1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14,69□□□□□ -0,06
Herc2Q4U2R1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC14,68□□□□□ -0,06
Herc2Q4U2R1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14,68□□□□□ -0,06
Herc2Q4U2R1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14,68□□□□□ -0,06
Herc2Q4U2R1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC14,68□□□□□ -0,06
Herc2Q4U2R1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14,67□□□□□ -0,06
Herc2Q4U2R1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14,67□□□□□ -0,06
Herc2Q4U2R1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14,67□□□□□ -0,06
Herc2Q4U2R1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14,67□□□□□ -0,06
Herc2Q4U2R1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14,66□□□□□ -0,06
Herc2Q4U2R1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14,66□□□□□ -0,06
Herc2Q4U2R1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14,65□□□□□ -0,06
Herc2Q4U2R1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14,65□□□□□ -0,06
Herc2Q4U2R1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14,65□□□□□ -0,06
Herc2Q4U2R1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14,65□□□□□ -0,06
Herc2Q4U2R1 Gm9910-201ENSMUST00000195385 1550 ntBASIC14,64□□□□□ -0,07
Herc2Q4U2R1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC14,64□□□□□ -0,07
Herc2Q4U2R1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14,64□□□□□ -0,07
Herc2Q4U2R1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14,64□□□□□ -0,07
Herc2Q4U2R1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14,64□□□□□ -0,07
Herc2Q4U2R1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14,64□□□□□ -0,07
Herc2Q4U2R1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14,63□□□□□ -0,07
Herc2Q4U2R1 Nsd1-203ENSMUST00000224156 1149 ntBASIC14,63□□□□□ -0,07
Herc2Q4U2R1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14,63□□□□□ -0,07
Herc2Q4U2R1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14,63□□□□□ -0,07
Herc2Q4U2R1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14,63□□□□□ -0,07
Herc2Q4U2R1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14,63□□□□□ -0,07
Herc2Q4U2R1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14,63□□□□□ -0,07
Herc2Q4U2R1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC14,63□□□□□ -0,07
Herc2Q4U2R1 Gm42501-201ENSMUST00000200220 1026 ntBASIC14,63□□□□□ -0,07
Herc2Q4U2R1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14,63□□□□□ -0,07
Herc2Q4U2R1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14,62□□□□□ -0,07
Herc2Q4U2R1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14,62□□□□□ -0,07
Herc2Q4U2R1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14,61□□□□□ -0,07
Herc2Q4U2R1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14,61□□□□□ -0,07
Herc2Q4U2R1 Gm43566-201ENSMUST00000196851 808 ntBASIC14,61□□□□□ -0,07
Herc2Q4U2R1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14,61□□□□□ -0,07
Herc2Q4U2R1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14,61□□□□□ -0,07
Herc2Q4U2R1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14,61□□□□□ -0,07
Herc2Q4U2R1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14,6□□□□□ -0,07
Herc2Q4U2R1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14,6□□□□□ -0,07
Herc2Q4U2R1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14,6□□□□□ -0,07
Herc2Q4U2R1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14,6□□□□□ -0,07
Herc2Q4U2R1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14,6□□□□□ -0,07
Herc2Q4U2R1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14,6□□□□□ -0,07
Herc2Q4U2R1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14,6□□□□□ -0,07
Herc2Q4U2R1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14,59□□□□□ -0,07
Herc2Q4U2R1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14,59□□□□□ -0,07
Herc2Q4U2R1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14,59□□□□□ -0,07
Herc2Q4U2R1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC14,58□□□□□ -0,07
Herc2Q4U2R1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14,58□□□□□ -0,08
Herc2Q4U2R1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14,58□□□□□ -0,08
Herc2Q4U2R1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14,57□□□□□ -0,08
Herc2Q4U2R1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14,57□□□□□ -0,08
Herc2Q4U2R1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14,57□□□□□ -0,08
Herc2Q4U2R1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14,57□□□□□ -0,08
Herc2Q4U2R1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC14,56□□□□□ -0,08
Herc2Q4U2R1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14,55□□□□□ -0,08
Herc2Q4U2R1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14,55□□□□□ -0,08
Herc2Q4U2R1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14,55□□□□□ -0,08
Herc2Q4U2R1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC14,55□□□□□ -0,08
Herc2Q4U2R1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14,55□□□□□ -0,08
Herc2Q4U2R1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14,55□□□□□ -0,08
Herc2Q4U2R1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14,54□□□□□ -0,08
Herc2Q4U2R1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14,54□□□□□ -0,08
Herc2Q4U2R1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC14,54□□□□□ -0,08
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms