Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.74■□□□□ 0.43
Hspg2Q05793 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hspg2Q05793 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.73■□□□□ 0.43
Hspg2Q05793 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
Hspg2Q05793 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hspg2Q05793 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.72■□□□□ 0.43
Hspg2Q05793 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hspg2Q05793 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hspg2Q05793 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hspg2Q05793 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hspg2Q05793 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hspg2Q05793 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.71■□□□□ 0.43
Hspg2Q05793 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hspg2Q05793 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.7■□□□□ 0.42
Hspg2Q05793 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.7■□□□□ 0.42
Hspg2Q05793 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hspg2Q05793 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hspg2Q05793 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Hspg2Q05793 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.69■□□□□ 0.42
Hspg2Q05793 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hspg2Q05793 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hspg2Q05793 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hspg2Q05793 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.68■□□□□ 0.42
Hspg2Q05793 Mir3960-201ENSMUST00000198213 73 ntBASIC17.68■□□□□ 0.42
Hspg2Q05793 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.68■□□□□ 0.42
Hspg2Q05793 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hspg2Q05793 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hspg2Q05793 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hspg2Q05793 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.67■□□□□ 0.42
Hspg2Q05793 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hspg2Q05793 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hspg2Q05793 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Hspg2Q05793 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.66■□□□□ 0.42
Hspg2Q05793 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hspg2Q05793 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hspg2Q05793 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hspg2Q05793 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.65■□□□□ 0.42
Hspg2Q05793 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hspg2Q05793 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hspg2Q05793 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hspg2Q05793 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hspg2Q05793 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hspg2Q05793 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hspg2Q05793 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hspg2Q05793 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.63■□□□□ 0.41
Hspg2Q05793 Gm5921-201ENSMUST00000075898 882 ntBASIC17.63■□□□□ 0.41
Hspg2Q05793 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hspg2Q05793 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hspg2Q05793 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hspg2Q05793 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hspg2Q05793 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hspg2Q05793 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.61■□□□□ 0.41
Hspg2Q05793 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.61■□□□□ 0.41
Hspg2Q05793 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.61■□□□□ 0.41
Hspg2Q05793 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.61■□□□□ 0.41
Hspg2Q05793 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hspg2Q05793 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hspg2Q05793 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hspg2Q05793 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.6■□□□□ 0.41
Hspg2Q05793 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Hspg2Q05793 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.6■□□□□ 0.41
Hspg2Q05793 Gm15546-201ENSMUST00000122095 826 ntBASIC17.6■□□□□ 0.41
Hspg2Q05793 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hspg2Q05793 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hspg2Q05793 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hspg2Q05793 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hspg2Q05793 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hspg2Q05793 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hspg2Q05793 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hspg2Q05793 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hspg2Q05793 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hspg2Q05793 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hspg2Q05793 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hspg2Q05793 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hspg2Q05793 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Hspg2Q05793 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hspg2Q05793 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.59■□□□□ 0.41
Hspg2Q05793 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.58■□□□□ 0.41
Hspg2Q05793 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hspg2Q05793 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hspg2Q05793 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hspg2Q05793 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hspg2Q05793 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hspg2Q05793 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hspg2Q05793 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hspg2Q05793 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hspg2Q05793 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hspg2Q05793 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hspg2Q05793 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.55■□□□□ 0.4
Hspg2Q05793 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.55■□□□□ 0.4
Hspg2Q05793 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hspg2Q05793 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.55■□□□□ 0.4
Hspg2Q05793 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.54■□□□□ 0.4
Hspg2Q05793 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hspg2Q05793 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Hspg2Q05793 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hspg2Q05793 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hspg2Q05793 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.54■□□□□ 0.4
Hspg2Q05793 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.54■□□□□ 0.4
Hspg2Q05793 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms