Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.33■□□□□ 0.69
SgcaP82350 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SgcaP82350 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SgcaP82350 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SgcaP82350 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
SgcaP82350 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SgcaP82350 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SgcaP82350 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SgcaP82350 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SgcaP82350 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SgcaP82350 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SgcaP82350 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SgcaP82350 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SgcaP82350 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SgcaP82350 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SgcaP82350 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SgcaP82350 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SgcaP82350 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcaP82350 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SgcaP82350 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SgcaP82350 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SgcaP82350 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SgcaP82350 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SgcaP82350 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SgcaP82350 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SgcaP82350 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.27■□□□□ 0.68
SgcaP82350 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SgcaP82350 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.27■□□□□ 0.68
SgcaP82350 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcaP82350 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SgcaP82350 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SgcaP82350 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SgcaP82350 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.25■□□□□ 0.67
SgcaP82350 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SgcaP82350 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SgcaP82350 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.24■□□□□ 0.67
SgcaP82350 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SgcaP82350 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SgcaP82350 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SgcaP82350 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SgcaP82350 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SgcaP82350 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SgcaP82350 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcaP82350 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcaP82350 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcaP82350 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SgcaP82350 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcaP82350 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SgcaP82350 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SgcaP82350 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SgcaP82350 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SgcaP82350 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
SgcaP82350 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
SgcaP82350 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SgcaP82350 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SgcaP82350 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SgcaP82350 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SgcaP82350 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SgcaP82350 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SgcaP82350 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SgcaP82350 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SgcaP82350 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SgcaP82350 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SgcaP82350 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SgcaP82350 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SgcaP82350 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcaP82350 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SgcaP82350 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SgcaP82350 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SgcaP82350 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SgcaP82350 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SgcaP82350 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SgcaP82350 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.18■□□□□ 0.66
SgcaP82350 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SgcaP82350 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SgcaP82350 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.17■□□□□ 0.66
SgcaP82350 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SgcaP82350 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SgcaP82350 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SgcaP82350 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SgcaP82350 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SgcaP82350 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SgcaP82350 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SgcaP82350 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SgcaP82350 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SgcaP82350 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SgcaP82350 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.15■□□□□ 0.66
SgcaP82350 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SgcaP82350 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SgcaP82350 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SgcaP82350 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SgcaP82350 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SgcaP82350 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SgcaP82350 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.14■□□□□ 0.65
SgcaP82350 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.14■□□□□ 0.65
SgcaP82350 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SgcaP82350 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SgcaP82350 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SgcaP82350 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SgcaP82350 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms