Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.96■■□□□ 1.27
Lhx1P63006 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Lhx1P63006 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Lhx1P63006 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.96■■□□□ 1.27
Lhx1P63006 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Lhx1P63006 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.96■■□□□ 1.27
Lhx1P63006 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.95■■□□□ 1.26
Lhx1P63006 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.95■■□□□ 1.26
Lhx1P63006 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.95■■□□□ 1.26
Lhx1P63006 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Lhx1P63006 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Lhx1P63006 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.94■■□□□ 1.26
Lhx1P63006 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lhx1P63006 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Lhx1P63006 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lhx1P63006 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.92■■□□□ 1.26
Lhx1P63006 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lhx1P63006 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lhx1P63006 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lhx1P63006 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lhx1P63006 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lhx1P63006 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Lhx1P63006 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Lhx1P63006 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Lhx1P63006 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.89■■□□□ 1.25
Lhx1P63006 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Lhx1P63006 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Lhx1P63006 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Lhx1P63006 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Lhx1P63006 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Lhx1P63006 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Lhx1P63006 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Lhx1P63006 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Lhx1P63006 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lhx1P63006 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lhx1P63006 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.86■■□□□ 1.25
Lhx1P63006 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Lhx1P63006 Gm45364-201ENSMUST00000210883 159 ntBASIC22.86■■□□□ 1.25
Lhx1P63006 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Lhx1P63006 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lhx1P63006 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.85■■□□□ 1.25
Lhx1P63006 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Lhx1P63006 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lhx1P63006 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Lhx1P63006 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Lhx1P63006 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.84■■□□□ 1.25
Lhx1P63006 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lhx1P63006 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Lhx1P63006 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Lhx1P63006 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Lhx1P63006 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Lhx1P63006 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Lhx1P63006 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Lhx1P63006 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Lhx1P63006 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Lhx1P63006 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Lhx1P63006 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Lhx1P63006 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Lhx1P63006 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Lhx1P63006 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Lhx1P63006 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Lhx1P63006 Mir6538-201ENSMUST00000183713 110 ntBASIC22.81■■□□□ 1.24
Lhx1P63006 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Lhx1P63006 Gm11175-201ENSMUST00000116172 543 ntBASIC22.8■■□□□ 1.24
Lhx1P63006 Gm9812-201ENSMUST00000061934 968 ntBASIC22.8■■□□□ 1.24
Lhx1P63006 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Lhx1P63006 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Lhx1P63006 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
Lhx1P63006 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.79■■□□□ 1.24
Lhx1P63006 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Lhx1P63006 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Lhx1P63006 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Lhx1P63006 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Lhx1P63006 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.78■■□□□ 1.24
Lhx1P63006 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Lhx1P63006 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.77■■□□□ 1.24
Lhx1P63006 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Lhx1P63006 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Lhx1P63006 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lhx1P63006 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lhx1P63006 Scarna2-201ENSMUST00000157560 414 ntBASIC22.75■■□□□ 1.23
Lhx1P63006 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lhx1P63006 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Lhx1P63006 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lhx1P63006 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Lhx1P63006 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.74■■□□□ 1.23
Lhx1P63006 Gm9806-201ENSMUST00000051080 552 ntBASIC22.74■■□□□ 1.23
Lhx1P63006 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Lhx1P63006 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Lhx1P63006 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Lhx1P63006 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.74■■□□□ 1.23
Lhx1P63006 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Lhx1P63006 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Lhx1P63006 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.73■■□□□ 1.23
Lhx1P63006 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Lhx1P63006 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Lhx1P63006 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lhx1P63006 Gm11687-201ENSMUST00000118911 886 ntBASIC22.71■■□□□ 1.23
Lhx1P63006 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lhx1P63006 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms