Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cks1bP61025 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cks1bP61025 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cks1bP61025 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cks1bP61025 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Cks1bP61025 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cks1bP61025 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cks1bP61025 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cks1bP61025 Gm26115-201ENSMUST00000175605 87 ntBASIC16.33■□□□□ 0.2
Cks1bP61025 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cks1bP61025 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cks1bP61025 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cks1bP61025 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cks1bP61025 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cks1bP61025 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cks1bP61025 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cks1bP61025 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.32■□□□□ 0.2
Cks1bP61025 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cks1bP61025 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cks1bP61025 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cks1bP61025 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cks1bP61025 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cks1bP61025 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cks1bP61025 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cks1bP61025 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cks1bP61025 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cks1bP61025 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cks1bP61025 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Cks1bP61025 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1bP61025 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1bP61025 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cks1bP61025 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1bP61025 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1bP61025 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cks1bP61025 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cks1bP61025 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cks1bP61025 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cks1bP61025 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cks1bP61025 Gm8109-201ENSMUST00000194076 746 ntBASIC16.27■□□□□ 0.2
Cks1bP61025 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cks1bP61025 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cks1bP61025 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cks1bP61025 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cks1bP61025 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cks1bP61025 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cks1bP61025 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cks1bP61025 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cks1bP61025 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cks1bP61025 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cks1bP61025 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cks1bP61025 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cks1bP61025 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cks1bP61025 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cks1bP61025 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cks1bP61025 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cks1bP61025 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cks1bP61025 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cks1bP61025 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cks1bP61025 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cks1bP61025 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cks1bP61025 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cks1bP61025 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cks1bP61025 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.21■□□□□ 0.19
Cks1bP61025 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cks1bP61025 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cks1bP61025 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cks1bP61025 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Cks1bP61025 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Cks1bP61025 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cks1bP61025 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cks1bP61025 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Cks1bP61025 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Cks1bP61025 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cks1bP61025 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1bP61025 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1bP61025 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1bP61025 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cks1bP61025 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1bP61025 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1bP61025 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1bP61025 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1bP61025 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1bP61025 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1bP61025 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cks1bP61025 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cks1bP61025 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Cks1bP61025 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cks1bP61025 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cks1bP61025 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cks1bP61025 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1bP61025 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1bP61025 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1bP61025 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1bP61025 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1bP61025 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.17■□□□□ 0.18
Cks1bP61025 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1bP61025 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1bP61025 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1bP61025 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cks1bP61025 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms