Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hist1h1aP43275 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hist1h1aP43275 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hist1h1aP43275 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hist1h1aP43275 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hist1h1aP43275 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19■□□□□ 0.63
Hist1h1aP43275 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hist1h1aP43275 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hist1h1aP43275 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hist1h1aP43275 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.99■□□□□ 0.63
Hist1h1aP43275 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hist1h1aP43275 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hist1h1aP43275 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hist1h1aP43275 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hist1h1aP43275 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hist1h1aP43275 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hist1h1aP43275 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hist1h1aP43275 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hist1h1aP43275 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hist1h1aP43275 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.96■□□□□ 0.63
Hist1h1aP43275 Gm45855-201ENSMUST00000212546 880 ntBASIC18.96■□□□□ 0.63
Hist1h1aP43275 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hist1h1aP43275 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h1aP43275 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h1aP43275 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h1aP43275 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h1aP43275 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hist1h1aP43275 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hist1h1aP43275 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hist1h1aP43275 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Hist1h1aP43275 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hist1h1aP43275 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.94■□□□□ 0.62
Hist1h1aP43275 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hist1h1aP43275 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h1aP43275 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h1aP43275 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h1aP43275 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h1aP43275 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h1aP43275 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h1aP43275 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h1aP43275 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h1aP43275 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hist1h1aP43275 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h1aP43275 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.92■□□□□ 0.62
Hist1h1aP43275 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h1aP43275 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h1aP43275 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h1aP43275 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h1aP43275 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Hist1h1aP43275 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h1aP43275 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h1aP43275 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h1aP43275 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h1aP43275 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h1aP43275 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h1aP43275 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Hist1h1aP43275 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h1aP43275 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hist1h1aP43275 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hist1h1aP43275 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h1aP43275 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h1aP43275 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Hist1h1aP43275 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h1aP43275 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h1aP43275 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h1aP43275 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h1aP43275 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hist1h1aP43275 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.87■□□□□ 0.61
Hist1h1aP43275 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h1aP43275 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h1aP43275 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Hist1h1aP43275 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hist1h1aP43275 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h1aP43275 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.86■□□□□ 0.61
Hist1h1aP43275 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.86■□□□□ 0.61
Hist1h1aP43275 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h1aP43275 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h1aP43275 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Hist1h1aP43275 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hist1h1aP43275 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hist1h1aP43275 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hist1h1aP43275 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hist1h1aP43275 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hist1h1aP43275 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hist1h1aP43275 Gm30023-201ENSMUST00000197970 889 ntBASIC18.84■□□□□ 0.61
Hist1h1aP43275 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.84■□□□□ 0.61
Hist1h1aP43275 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.83■□□□□ 0.61
Hist1h1aP43275 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hist1h1aP43275 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hist1h1aP43275 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hist1h1aP43275 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Hist1h1aP43275 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hist1h1aP43275 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hist1h1aP43275 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.82■□□□□ 0.6
Hist1h1aP43275 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Hist1h1aP43275 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hist1h1aP43275 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Hist1h1aP43275 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.82■□□□□ 0.6
Hist1h1aP43275 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hist1h1aP43275 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms