Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a11P31650 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Slc6a11P31650 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a11P31650 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a11P31650 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a11P31650 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Slc6a11P31650 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Slc6a11P31650 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Slc6a11P31650 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Slc6a11P31650 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.96■■□□□ 1.11
Slc6a11P31650 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.96■■□□□ 1.11
Slc6a11P31650 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Slc6a11P31650 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc6a11P31650 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc6a11P31650 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.94■■□□□ 1.1
Slc6a11P31650 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc6a11P31650 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc6a11P31650 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc6a11P31650 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a11P31650 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a11P31650 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Slc6a11P31650 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a11P31650 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a11P31650 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a11P31650 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc6a11P31650 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc6a11P31650 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Slc6a11P31650 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Slc6a11P31650 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc6a11P31650 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc6a11P31650 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc6a11P31650 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Slc6a11P31650 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Slc6a11P31650 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Slc6a11P31650 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc6a11P31650 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Slc6a11P31650 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc6a11P31650 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc6a11P31650 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc6a11P31650 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
Slc6a11P31650 Gm7432-201ENSMUST00000210343 879 ntBASIC21.88■■□□□ 1.09
Slc6a11P31650 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc6a11P31650 Nkain2-201ENSMUST00000092602 558 ntBASIC21.88■■□□□ 1.09
Slc6a11P31650 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc6a11P31650 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a11P31650 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a11P31650 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a11P31650 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Slc6a11P31650 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a11P31650 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc6a11P31650 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Slc6a11P31650 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.86■■□□□ 1.09
Slc6a11P31650 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.86■■□□□ 1.09
Slc6a11P31650 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.86■■□□□ 1.09
Slc6a11P31650 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc6a11P31650 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Slc6a11P31650 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.85■■□□□ 1.09
Slc6a11P31650 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.84■■□□□ 1.09
Slc6a11P31650 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a11P31650 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a11P31650 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc6a11P31650 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.83■■□□□ 1.09
Slc6a11P31650 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a11P31650 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a11P31650 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.82■■□□□ 1.08
Slc6a11P31650 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a11P31650 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a11P31650 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Slc6a11P31650 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a11P31650 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a11P31650 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a11P31650 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Slc6a11P31650 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a11P31650 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a11P31650 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a11P31650 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a11P31650 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a11P31650 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.78■■□□□ 1.08
Slc6a11P31650 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a11P31650 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a11P31650 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a11P31650 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Slc6a11P31650 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a11P31650 Gm30023-201ENSMUST00000197970 889 ntBASIC21.77■■□□□ 1.08
Slc6a11P31650 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a11P31650 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Slc6a11P31650 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.77■■□□□ 1.07
Slc6a11P31650 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.77■■□□□ 1.07
Slc6a11P31650 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.76■■□□□ 1.07
Slc6a11P31650 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a11P31650 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a11P31650 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a11P31650 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a11P31650 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a11P31650 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a11P31650 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a11P31650 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a11P31650 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a11P31650 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Slc6a11P31650 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms