Protein–RNA interactions for Protein: P28063

Psmb8, Proteasome subunit beta type-8, mousemouse

Predictions only

Length 276 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb8P28063 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Psmb8P28063 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Psmb8P28063 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Psmb8P28063 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Psmb8P28063 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Psmb8P28063 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.45■□□□□ 0.38
Psmb8P28063 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Psmb8P28063 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Psmb8P28063 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.44■□□□□ 0.38
Psmb8P28063 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Psmb8P28063 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
Psmb8P28063 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Psmb8P28063 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.43■□□□□ 0.38
Psmb8P28063 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Psmb8P28063 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Psmb8P28063 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Psmb8P28063 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Psmb8P28063 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Psmb8P28063 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Psmb8P28063 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Psmb8P28063 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Psmb8P28063 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Psmb8P28063 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Psmb8P28063 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Psmb8P28063 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb8P28063 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb8P28063 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.39■□□□□ 0.37
Psmb8P28063 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Psmb8P28063 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Psmb8P28063 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.37■□□□□ 0.37
Psmb8P28063 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb8P28063 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Psmb8P28063 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.36■□□□□ 0.37
Psmb8P28063 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb8P28063 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb8P28063 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb8P28063 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.36■□□□□ 0.37
Psmb8P28063 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb8P28063 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb8P28063 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb8P28063 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Psmb8P28063 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.36■□□□□ 0.37
Psmb8P28063 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Psmb8P28063 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb8P28063 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb8P28063 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.35■□□□□ 0.37
Psmb8P28063 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb8P28063 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Psmb8P28063 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Psmb8P28063 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Psmb8P28063 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Psmb8P28063 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Psmb8P28063 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Psmb8P28063 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Psmb8P28063 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Psmb8P28063 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.32■□□□□ 0.36
Psmb8P28063 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Psmb8P28063 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Psmb8P28063 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Psmb8P28063 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Psmb8P28063 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Psmb8P28063 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Psmb8P28063 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Psmb8P28063 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Psmb8P28063 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Psmb8P28063 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Psmb8P28063 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Psmb8P28063 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.31■□□□□ 0.36
Psmb8P28063 Gm4799-201ENSMUST00000095396 657 ntBASIC17.31■□□□□ 0.36
Psmb8P28063 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Psmb8P28063 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.3■□□□□ 0.36
Psmb8P28063 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Psmb8P28063 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Psmb8P28063 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.3■□□□□ 0.36
Psmb8P28063 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.29■□□□□ 0.36
Psmb8P28063 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Psmb8P28063 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Psmb8P28063 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.29■□□□□ 0.36
Psmb8P28063 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Psmb8P28063 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Psmb8P28063 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Psmb8P28063 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Psmb8P28063 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Psmb8P28063 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.28■□□□□ 0.36
Psmb8P28063 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Psmb8P28063 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Psmb8P28063 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Psmb8P28063 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.26■□□□□ 0.35
Psmb8P28063 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.26■□□□□ 0.35
Psmb8P28063 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Psmb8P28063 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Psmb8P28063 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Psmb8P28063 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Psmb8P28063 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Psmb8P28063 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Psmb8P28063 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Psmb8P28063 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Psmb8P28063 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Psmb8P28063 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Psmb8P28063 Mir3960-201ENSMUST00000198213 73 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms