Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ctla4P09793 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ctla4P09793 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ctla4P09793 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.61■■□□□ 1.05
Ctla4P09793 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ctla4P09793 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ctla4P09793 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ctla4P09793 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ctla4P09793 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ctla4P09793 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ctla4P09793 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ctla4P09793 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ctla4P09793 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ctla4P09793 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ctla4P09793 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ctla4P09793 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.56■■□□□ 1.04
Ctla4P09793 Gm6311-201ENSMUST00000073790 878 ntBASIC21.56■■□□□ 1.04
Ctla4P09793 Gm4799-201ENSMUST00000095396 657 ntBASIC21.56■■□□□ 1.04
Ctla4P09793 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ctla4P09793 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ctla4P09793 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.55■■□□□ 1.04
Ctla4P09793 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ctla4P09793 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ctla4P09793 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ctla4P09793 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.53■■□□□ 1.04
Ctla4P09793 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ctla4P09793 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.53■■□□□ 1.04
Ctla4P09793 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ctla4P09793 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ctla4P09793 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ctla4P09793 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ctla4P09793 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ctla4P09793 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ctla4P09793 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.52■■□□□ 1.04
Ctla4P09793 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ctla4P09793 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ctla4P09793 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Ctla4P09793 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ctla4P09793 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ctla4P09793 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ctla4P09793 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ctla4P09793 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ctla4P09793 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ctla4P09793 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.49■■□□□ 1.03
Ctla4P09793 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ctla4P09793 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.48■■□□□ 1.03
Ctla4P09793 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ctla4P09793 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.48■■□□□ 1.03
Ctla4P09793 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Ctla4P09793 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Ctla4P09793 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.48■■□□□ 1.03
Ctla4P09793 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ctla4P09793 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.47■■□□□ 1.03
Ctla4P09793 Mir3960-201ENSMUST00000198213 73 ntBASIC21.46■■□□□ 1.03
Ctla4P09793 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ctla4P09793 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ctla4P09793 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ctla4P09793 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ctla4P09793 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.43■■□□□ 1.02
Ctla4P09793 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ctla4P09793 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.43■■□□□ 1.02
Ctla4P09793 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ctla4P09793 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ctla4P09793 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.42■■□□□ 1.02
Ctla4P09793 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ctla4P09793 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.42■■□□□ 1.02
Ctla4P09793 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.41■■□□□ 1.02
Ctla4P09793 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ctla4P09793 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ctla4P09793 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Ctla4P09793 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.41■■□□□ 1.02
Ctla4P09793 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ctla4P09793 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ctla4P09793 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ctla4P09793 Gm45364-201ENSMUST00000210883 159 ntBASIC21.4■■□□□ 1.02
Ctla4P09793 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ctla4P09793 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.39■■□□□ 1.01
Ctla4P09793 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ctla4P09793 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ctla4P09793 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ctla4P09793 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ctla4P09793 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ctla4P09793 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ctla4P09793 Gm11175-201ENSMUST00000116172 543 ntBASIC21.37■■□□□ 1.01
Ctla4P09793 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ctla4P09793 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ctla4P09793 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ctla4P09793 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ctla4P09793 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ctla4P09793 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ctla4P09793 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ctla4P09793 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ctla4P09793 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ctla4P09793 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.35■■□□□ 1.01
Ctla4P09793 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ctla4P09793 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ctla4P09793 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ctla4P09793 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ctla4P09793 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ctla4P09793 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms