Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.95■■□□□ 1.1
ApoeP08226 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
ApoeP08226 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
ApoeP08226 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ApoeP08226 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ApoeP08226 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
ApoeP08226 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
ApoeP08226 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ApoeP08226 Particl-201ENSMUST00000205370 1560 ntBASIC21.93■■□□□ 1.1
ApoeP08226 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ApoeP08226 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ApoeP08226 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ApoeP08226 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.93■■□□□ 1.1
ApoeP08226 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ApoeP08226 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ApoeP08226 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ApoeP08226 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.92■■□□□ 1.1
ApoeP08226 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ApoeP08226 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ApoeP08226 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ApoeP08226 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ApoeP08226 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ApoeP08226 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ApoeP08226 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.9■■□□□ 1.1
ApoeP08226 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ApoeP08226 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ApoeP08226 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ApoeP08226 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.89■■□□□ 1.09
ApoeP08226 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
ApoeP08226 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.88■■□□□ 1.09
ApoeP08226 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ApoeP08226 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ApoeP08226 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.87■■□□□ 1.09
ApoeP08226 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ApoeP08226 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ApoeP08226 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ApoeP08226 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ApoeP08226 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
ApoeP08226 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
ApoeP08226 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ApoeP08226 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ApoeP08226 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
ApoeP08226 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ApoeP08226 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ApoeP08226 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
ApoeP08226 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ApoeP08226 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ApoeP08226 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ApoeP08226 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ApoeP08226 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ApoeP08226 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.83■■□□□ 1.09
ApoeP08226 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ApoeP08226 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ApoeP08226 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ApoeP08226 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
ApoeP08226 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.82■■□□□ 1.08
ApoeP08226 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ApoeP08226 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ApoeP08226 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ApoeP08226 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.8■■□□□ 1.08
ApoeP08226 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ApoeP08226 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.8■■□□□ 1.08
ApoeP08226 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ApoeP08226 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
ApoeP08226 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ApoeP08226 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ApoeP08226 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ApoeP08226 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ApoeP08226 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ApoeP08226 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ApoeP08226 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.77■■□□□ 1.08
ApoeP08226 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ApoeP08226 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ApoeP08226 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
ApoeP08226 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ApoeP08226 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ApoeP08226 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ApoeP08226 Gm30023-201ENSMUST00000197970 889 ntBASIC21.76■■□□□ 1.07
ApoeP08226 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ApoeP08226 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.75■■□□□ 1.07
ApoeP08226 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ApoeP08226 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ApoeP08226 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ApoeP08226 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ApoeP08226 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ApoeP08226 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
ApoeP08226 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.73■■□□□ 1.07
ApoeP08226 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ApoeP08226 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.73■■□□□ 1.07
ApoeP08226 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ApoeP08226 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ApoeP08226 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ApoeP08226 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ApoeP08226 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ApoeP08226 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ApoeP08226 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ApoeP08226 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ApoeP08226 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.71■■□□□ 1.07
ApoeP08226 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ApoeP08226 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms