Protein–RNA interactions for Protein: O88951

Lin7b, Protein lin-7 homolog B, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin7bO88951 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lin7bO88951 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lin7bO88951 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.31■□□□□ 0.84
Lin7bO88951 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lin7bO88951 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin7bO88951 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lin7bO88951 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.3■□□□□ 0.84
Lin7bO88951 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Lin7bO88951 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lin7bO88951 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lin7bO88951 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lin7bO88951 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.28■□□□□ 0.84
Lin7bO88951 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lin7bO88951 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lin7bO88951 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lin7bO88951 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lin7bO88951 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lin7bO88951 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lin7bO88951 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lin7bO88951 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lin7bO88951 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lin7bO88951 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lin7bO88951 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lin7bO88951 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lin7bO88951 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lin7bO88951 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lin7bO88951 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Lin7bO88951 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lin7bO88951 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Lin7bO88951 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lin7bO88951 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lin7bO88951 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lin7bO88951 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lin7bO88951 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin7bO88951 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin7bO88951 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin7bO88951 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin7bO88951 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lin7bO88951 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin7bO88951 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.22■□□□□ 0.83
Lin7bO88951 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lin7bO88951 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lin7bO88951 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.22■□□□□ 0.83
Lin7bO88951 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lin7bO88951 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lin7bO88951 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Lin7bO88951 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.21■□□□□ 0.83
Lin7bO88951 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Lin7bO88951 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin7bO88951 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.2■□□□□ 0.82
Lin7bO88951 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lin7bO88951 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin7bO88951 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lin7bO88951 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin7bO88951 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lin7bO88951 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Lin7bO88951 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lin7bO88951 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lin7bO88951 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lin7bO88951 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.15■□□□□ 0.82
Lin7bO88951 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lin7bO88951 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lin7bO88951 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lin7bO88951 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Lin7bO88951 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lin7bO88951 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lin7bO88951 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lin7bO88951 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.13■□□□□ 0.81
Lin7bO88951 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.13■□□□□ 0.81
Lin7bO88951 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lin7bO88951 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.13■□□□□ 0.81
Lin7bO88951 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lin7bO88951 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.12■□□□□ 0.81
Lin7bO88951 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Lin7bO88951 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lin7bO88951 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin7bO88951 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lin7bO88951 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin7bO88951 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.11■□□□□ 0.81
Lin7bO88951 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lin7bO88951 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin7bO88951 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin7bO88951 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.11■□□□□ 0.81
Lin7bO88951 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin7bO88951 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin7bO88951 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin7bO88951 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Lin7bO88951 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin7bO88951 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lin7bO88951 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin7bO88951 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin7bO88951 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin7bO88951 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Lin7bO88951 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin7bO88951 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lin7bO88951 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lin7bO88951 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Lin7bO88951 Particl-201ENSMUST00000205370 1560 ntBASIC20.08■□□□□ 0.8
Lin7bO88951 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin7bO88951 Gm9397-201ENSMUST00000200125 605 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms