Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Dkk1O54908 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.04■□□□□ 0.8
Dkk1O54908 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Dkk1O54908 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dkk1O54908 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dkk1O54908 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Dkk1O54908 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.03■□□□□ 0.8
Dkk1O54908 Gm11599-201ENSMUST00000118720 878 ntBASIC20.02■□□□□ 0.8
Dkk1O54908 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dkk1O54908 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Dkk1O54908 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Dkk1O54908 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Dkk1O54908 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Dkk1O54908 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Dkk1O54908 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
Dkk1O54908 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Dkk1O54908 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20■□□□□ 0.79
Dkk1O54908 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Dkk1O54908 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20■□□□□ 0.79
Dkk1O54908 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.99■□□□□ 0.79
Dkk1O54908 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Dkk1O54908 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.98■□□□□ 0.79
Dkk1O54908 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.98■□□□□ 0.79
Dkk1O54908 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Dkk1O54908 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Dkk1O54908 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Dkk1O54908 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Dkk1O54908 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Dkk1O54908 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Dkk1O54908 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Dkk1O54908 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Dkk1O54908 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.96■□□□□ 0.79
Dkk1O54908 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Dkk1O54908 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Dkk1O54908 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dkk1O54908 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Dkk1O54908 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Dkk1O54908 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Dkk1O54908 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Dkk1O54908 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dkk1O54908 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.92■□□□□ 0.78
Dkk1O54908 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Dkk1O54908 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Dkk1O54908 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dkk1O54908 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dkk1O54908 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dkk1O54908 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dkk1O54908 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC19.91■□□□□ 0.78
Dkk1O54908 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Dkk1O54908 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Dkk1O54908 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Dkk1O54908 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Dkk1O54908 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dkk1O54908 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Dkk1O54908 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dkk1O54908 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Dkk1O54908 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Dkk1O54908 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Dkk1O54908 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Dkk1O54908 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Dkk1O54908 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Dkk1O54908 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Dkk1O54908 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Dkk1O54908 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dkk1O54908 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Dkk1O54908 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Dkk1O54908 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Dkk1O54908 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Dkk1O54908 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.86■□□□□ 0.77
Dkk1O54908 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Dkk1O54908 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Dkk1O54908 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Dkk1O54908 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Dkk1O54908 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Dkk1O54908 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Dkk1O54908 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.84■□□□□ 0.77
Dkk1O54908 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Dkk1O54908 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Dkk1O54908 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Dkk1O54908 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Dkk1O54908 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Dkk1O54908 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Dkk1O54908 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Dkk1O54908 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dkk1O54908 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dkk1O54908 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dkk1O54908 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Dkk1O54908 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Dkk1O54908 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.82■□□□□ 0.76
Dkk1O54908 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Dkk1O54908 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Dkk1O54908 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Dkk1O54908 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Dkk1O54908 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Dkk1O54908 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Dkk1O54908 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dkk1O54908 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dkk1O54908 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dkk1O54908 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Dkk1O54908 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms