Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Nr1i3O35627 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Nr1i3O35627 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Nr1i3O35627 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Nr1i3O35627 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.11■■□□□ 1.61
Nr1i3O35627 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
Nr1i3O35627 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Nr1i3O35627 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Nr1i3O35627 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.1■■□□□ 1.61
Nr1i3O35627 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Nr1i3O35627 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Nr1i3O35627 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.09■■□□□ 1.61
Nr1i3O35627 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nr1i3O35627 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nr1i3O35627 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Nr1i3O35627 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
Nr1i3O35627 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Nr1i3O35627 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Nr1i3O35627 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Nr1i3O35627 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Nr1i3O35627 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.06■■□□□ 1.6
Nr1i3O35627 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Nr1i3O35627 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Nr1i3O35627 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Nr1i3O35627 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Nr1i3O35627 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Nr1i3O35627 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Nr1i3O35627 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Nr1i3O35627 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
Nr1i3O35627 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Nr1i3O35627 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Nr1i3O35627 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Nr1i3O35627 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Nr1i3O35627 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Nr1i3O35627 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Nr1i3O35627 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Nr1i3O35627 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Nr1i3O35627 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Nr1i3O35627 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25■■□□□ 1.59
Nr1i3O35627 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Nr1i3O35627 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Nr1i3O35627 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Nr1i3O35627 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Nr1i3O35627 Nkain2-201ENSMUST00000092602 558 ntBASIC24.98■■□□□ 1.59
Nr1i3O35627 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nr1i3O35627 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nr1i3O35627 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Nr1i3O35627 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nr1i3O35627 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nr1i3O35627 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Nr1i3O35627 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Nr1i3O35627 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Nr1i3O35627 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Nr1i3O35627 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Nr1i3O35627 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Nr1i3O35627 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Nr1i3O35627 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Nr1i3O35627 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.92■■□□□ 1.58
Nr1i3O35627 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Nr1i3O35627 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.92■■□□□ 1.58
Nr1i3O35627 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Nr1i3O35627 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.92■■□□□ 1.58
Nr1i3O35627 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.91■■□□□ 1.58
Nr1i3O35627 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Nr1i3O35627 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.91■■□□□ 1.58
Nr1i3O35627 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.91■■□□□ 1.58
Nr1i3O35627 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Nr1i3O35627 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Nr1i3O35627 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Nr1i3O35627 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Nr1i3O35627 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Nr1i3O35627 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Nr1i3O35627 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Nr1i3O35627 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Nr1i3O35627 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Nr1i3O35627 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Nr1i3O35627 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.88■■□□□ 1.57
Nr1i3O35627 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.87■■□□□ 1.57
Nr1i3O35627 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Nr1i3O35627 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.85■■□□□ 1.57
Nr1i3O35627 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.85■■□□□ 1.57
Nr1i3O35627 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Nr1i3O35627 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Nr1i3O35627 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Nr1i3O35627 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Nr1i3O35627 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Nr1i3O35627 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Nr1i3O35627 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Nr1i3O35627 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.84■■□□□ 1.57
Nr1i3O35627 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
Nr1i3O35627 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Nr1i3O35627 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Nr1i3O35627 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Nr1i3O35627 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Nr1i3O35627 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Nr1i3O35627 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Nr1i3O35627 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.82■■□□□ 1.56
Nr1i3O35627 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Nr1i3O35627 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Nr1i3O35627 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms