Protein–RNA interactions for Protein: O35280

Chek1, Serine/threonine-protein kinase Chk1, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chek1O35280 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chek1O35280 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chek1O35280 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chek1O35280 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chek1O35280 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Chek1O35280 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Chek1O35280 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chek1O35280 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.89■□□□□ 0.61
Chek1O35280 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chek1O35280 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chek1O35280 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chek1O35280 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chek1O35280 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Chek1O35280 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chek1O35280 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Chek1O35280 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chek1O35280 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chek1O35280 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chek1O35280 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chek1O35280 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chek1O35280 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.87■□□□□ 0.61
Chek1O35280 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chek1O35280 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chek1O35280 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chek1O35280 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chek1O35280 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chek1O35280 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chek1O35280 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chek1O35280 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Chek1O35280 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chek1O35280 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chek1O35280 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.85■□□□□ 0.61
Chek1O35280 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.85■□□□□ 0.61
Chek1O35280 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chek1O35280 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chek1O35280 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chek1O35280 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chek1O35280 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chek1O35280 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chek1O35280 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chek1O35280 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chek1O35280 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Chek1O35280 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chek1O35280 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Chek1O35280 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.82■□□□□ 0.6
Chek1O35280 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chek1O35280 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chek1O35280 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chek1O35280 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chek1O35280 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chek1O35280 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chek1O35280 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chek1O35280 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chek1O35280 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chek1O35280 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Chek1O35280 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.81■□□□□ 0.6
Chek1O35280 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Chek1O35280 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chek1O35280 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chek1O35280 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chek1O35280 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.8■□□□□ 0.6
Chek1O35280 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chek1O35280 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chek1O35280 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chek1O35280 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chek1O35280 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Chek1O35280 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chek1O35280 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Chek1O35280 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chek1O35280 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chek1O35280 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Chek1O35280 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chek1O35280 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chek1O35280 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chek1O35280 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chek1O35280 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chek1O35280 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Chek1O35280 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chek1O35280 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chek1O35280 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Chek1O35280 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chek1O35280 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chek1O35280 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chek1O35280 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chek1O35280 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chek1O35280 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chek1O35280 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chek1O35280 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chek1O35280 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chek1O35280 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chek1O35280 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chek1O35280 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chek1O35280 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chek1O35280 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Chek1O35280 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chek1O35280 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chek1O35280 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chek1O35280 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chek1O35280 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.75■□□□□ 0.59
Chek1O35280 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms