Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
9930021J03RikH3BKP8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
9930021J03RikH3BKP8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
9930021J03RikH3BKP8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
9930021J03RikH3BKP8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
9930021J03RikH3BKP8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
9930021J03RikH3BKP8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
9930021J03RikH3BKP8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
9930021J03RikH3BKP8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.8■■□□□ 1.08
9930021J03RikH3BKP8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
9930021J03RikH3BKP8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
9930021J03RikH3BKP8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
9930021J03RikH3BKP8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
9930021J03RikH3BKP8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
9930021J03RikH3BKP8 Gm37136-201ENSMUST00000194368 194 ntBASIC21.77■■□□□ 1.08
9930021J03RikH3BKP8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
9930021J03RikH3BKP8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
9930021J03RikH3BKP8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
9930021J03RikH3BKP8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.76■■□□□ 1.07
9930021J03RikH3BKP8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
9930021J03RikH3BKP8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
9930021J03RikH3BKP8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
9930021J03RikH3BKP8 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.74■■□□□ 1.07
9930021J03RikH3BKP8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.73■■□□□ 1.07
9930021J03RikH3BKP8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.73■■□□□ 1.07
9930021J03RikH3BKP8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
9930021J03RikH3BKP8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
9930021J03RikH3BKP8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.72■■□□□ 1.07
9930021J03RikH3BKP8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
9930021J03RikH3BKP8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
9930021J03RikH3BKP8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
9930021J03RikH3BKP8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
9930021J03RikH3BKP8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
9930021J03RikH3BKP8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
9930021J03RikH3BKP8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
9930021J03RikH3BKP8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
9930021J03RikH3BKP8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
9930021J03RikH3BKP8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
9930021J03RikH3BKP8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.68■■□□□ 1.06
9930021J03RikH3BKP8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.68■■□□□ 1.06
9930021J03RikH3BKP8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
9930021J03RikH3BKP8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
9930021J03RikH3BKP8 Gm45364-201ENSMUST00000210883 159 ntBASIC21.67■■□□□ 1.06
9930021J03RikH3BKP8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.66■■□□□ 1.06
9930021J03RikH3BKP8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
9930021J03RikH3BKP8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
9930021J03RikH3BKP8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
9930021J03RikH3BKP8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
9930021J03RikH3BKP8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
9930021J03RikH3BKP8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
9930021J03RikH3BKP8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
9930021J03RikH3BKP8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
9930021J03RikH3BKP8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
9930021J03RikH3BKP8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
9930021J03RikH3BKP8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
9930021J03RikH3BKP8 Gm6311-201ENSMUST00000073790 878 ntBASIC21.63■■□□□ 1.05
9930021J03RikH3BKP8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
9930021J03RikH3BKP8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
9930021J03RikH3BKP8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
9930021J03RikH3BKP8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.63■■□□□ 1.05
9930021J03RikH3BKP8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
9930021J03RikH3BKP8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
9930021J03RikH3BKP8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
9930021J03RikH3BKP8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
9930021J03RikH3BKP8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
9930021J03RikH3BKP8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.61■■□□□ 1.05
9930021J03RikH3BKP8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
9930021J03RikH3BKP8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.61■■□□□ 1.05
9930021J03RikH3BKP8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
9930021J03RikH3BKP8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
9930021J03RikH3BKP8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.6■■□□□ 1.05
9930021J03RikH3BKP8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
9930021J03RikH3BKP8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
9930021J03RikH3BKP8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
9930021J03RikH3BKP8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
9930021J03RikH3BKP8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
9930021J03RikH3BKP8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
9930021J03RikH3BKP8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
9930021J03RikH3BKP8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
9930021J03RikH3BKP8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
9930021J03RikH3BKP8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
9930021J03RikH3BKP8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
9930021J03RikH3BKP8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
9930021J03RikH3BKP8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
9930021J03RikH3BKP8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
9930021J03RikH3BKP8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
9930021J03RikH3BKP8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
9930021J03RikH3BKP8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
9930021J03RikH3BKP8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
9930021J03RikH3BKP8 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.54■■□□□ 1.04
9930021J03RikH3BKP8 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.54■■□□□ 1.04
9930021J03RikH3BKP8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
9930021J03RikH3BKP8 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.54■■□□□ 1.04
9930021J03RikH3BKP8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
9930021J03RikH3BKP8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
9930021J03RikH3BKP8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.53■■□□□ 1.04
9930021J03RikH3BKP8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.53■■□□□ 1.04
9930021J03RikH3BKP8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
9930021J03RikH3BKP8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
9930021J03RikH3BKP8 Gm11175-201ENSMUST00000116172 543 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms