Protein–RNA interactions for Protein: E9Q7P2

Cacna1i, Voltage-dependent T-type calcium channel subunit alpha, mousemouse

Predictions only

Length 2,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1iE9Q7P2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1iE9Q7P2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1iE9Q7P2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.15■□□□□ 0.66
Cacna1iE9Q7P2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.15■□□□□ 0.66
Cacna1iE9Q7P2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1iE9Q7P2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1iE9Q7P2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cacna1iE9Q7P2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1iE9Q7P2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1iE9Q7P2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cacna1iE9Q7P2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1iE9Q7P2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1iE9Q7P2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1iE9Q7P2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1iE9Q7P2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cacna1iE9Q7P2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cacna1iE9Q7P2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.13■□□□□ 0.65
Cacna1iE9Q7P2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.13■□□□□ 0.65
Cacna1iE9Q7P2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1iE9Q7P2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1iE9Q7P2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1iE9Q7P2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1iE9Q7P2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1iE9Q7P2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1iE9Q7P2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1iE9Q7P2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1iE9Q7P2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1iE9Q7P2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1iE9Q7P2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.1■□□□□ 0.65
Cacna1iE9Q7P2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1iE9Q7P2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cacna1iE9Q7P2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1iE9Q7P2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1iE9Q7P2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1iE9Q7P2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.08■□□□□ 0.65
Cacna1iE9Q7P2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.08■□□□□ 0.64
Cacna1iE9Q7P2 Gm12366-201ENSMUST00000121722 873 ntBASIC19.08■□□□□ 0.64
Cacna1iE9Q7P2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.08■□□□□ 0.64
Cacna1iE9Q7P2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.08■□□□□ 0.64
Cacna1iE9Q7P2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.08■□□□□ 0.64
Cacna1iE9Q7P2 Gm5786-201ENSMUST00000085368 882 ntBASIC19.08■□□□□ 0.64
Cacna1iE9Q7P2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1iE9Q7P2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1iE9Q7P2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1iE9Q7P2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1iE9Q7P2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.06■□□□□ 0.64
Cacna1iE9Q7P2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.06■□□□□ 0.64
Cacna1iE9Q7P2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.06■□□□□ 0.64
Cacna1iE9Q7P2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cacna1iE9Q7P2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1iE9Q7P2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1iE9Q7P2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1iE9Q7P2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.05■□□□□ 0.64
Cacna1iE9Q7P2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1iE9Q7P2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1iE9Q7P2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1iE9Q7P2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1iE9Q7P2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.04■□□□□ 0.64
Cacna1iE9Q7P2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.04■□□□□ 0.64
Cacna1iE9Q7P2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1iE9Q7P2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cacna1iE9Q7P2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1iE9Q7P2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1iE9Q7P2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1iE9Q7P2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1iE9Q7P2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1iE9Q7P2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.03■□□□□ 0.64
Cacna1iE9Q7P2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cacna1iE9Q7P2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Cacna1iE9Q7P2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1iE9Q7P2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1iE9Q7P2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cacna1iE9Q7P2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1iE9Q7P2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1iE9Q7P2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cacna1iE9Q7P2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1iE9Q7P2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1iE9Q7P2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1iE9Q7P2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cacna1iE9Q7P2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19■□□□□ 0.63
Cacna1iE9Q7P2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Cacna1iE9Q7P2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cacna1iE9Q7P2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1iE9Q7P2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.99■□□□□ 0.63
Cacna1iE9Q7P2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1iE9Q7P2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1iE9Q7P2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Cacna1iE9Q7P2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Cacna1iE9Q7P2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.99■□□□□ 0.63
Cacna1iE9Q7P2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1iE9Q7P2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1iE9Q7P2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1iE9Q7P2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1iE9Q7P2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1iE9Q7P2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.98■□□□□ 0.63
Cacna1iE9Q7P2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1iE9Q7P2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1iE9Q7P2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cacna1iE9Q7P2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1iE9Q7P2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms