Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Igkv3-4A0A140T8Q4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv3-4A0A140T8Q4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv3-4A0A140T8Q4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv3-4A0A140T8Q4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Igkv3-4A0A140T8Q4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv3-4A0A140T8Q4 Gm24804-201ENSMUST00000174982 85 ntBASIC14.49□□□□□ -0.09
Igkv3-4A0A140T8Q4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Igkv3-4A0A140T8Q4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv3-4A0A140T8Q4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv3-4A0A140T8Q4 Gm16148-201ENSMUST00000119653 893 ntBASIC14.48□□□□□ -0.09
Igkv3-4A0A140T8Q4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv3-4A0A140T8Q4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv3-4A0A140T8Q4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv3-4A0A140T8Q4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-4A0A140T8Q4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Igkv3-4A0A140T8Q4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-4A0A140T8Q4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-4A0A140T8Q4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-4A0A140T8Q4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Igkv3-4A0A140T8Q4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-4A0A140T8Q4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv3-4A0A140T8Q4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv3-4A0A140T8Q4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Igkv3-4A0A140T8Q4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv3-4A0A140T8Q4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv3-4A0A140T8Q4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv3-4A0A140T8Q4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv3-4A0A140T8Q4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv3-4A0A140T8Q4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC14.45□□□□□ -0.1
Igkv3-4A0A140T8Q4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Igkv3-4A0A140T8Q4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-4A0A140T8Q4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-4A0A140T8Q4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-4A0A140T8Q4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-4A0A140T8Q4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Igkv3-4A0A140T8Q4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.43□□□□□ -0.1
Igkv3-4A0A140T8Q4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-4A0A140T8Q4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Igkv3-4A0A140T8Q4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Igkv3-4A0A140T8Q4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-4A0A140T8Q4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-4A0A140T8Q4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Igkv3-4A0A140T8Q4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.42□□□□□ -0.1
Igkv3-4A0A140T8Q4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Igkv3-4A0A140T8Q4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-4A0A140T8Q4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-4A0A140T8Q4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.42□□□□□ -0.1
Igkv3-4A0A140T8Q4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-4A0A140T8Q4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC14.42□□□□□ -0.1
Igkv3-4A0A140T8Q4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-4A0A140T8Q4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv3-4A0A140T8Q4 Il17rd-202ENSMUST00000223942 2186 ntBASIC14.41□□□□□ -0.1
Igkv3-4A0A140T8Q4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Igkv3-4A0A140T8Q4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-4A0A140T8Q4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-4A0A140T8Q4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-4A0A140T8Q4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-4A0A140T8Q4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC14.41□□□□□ -0.1
Igkv3-4A0A140T8Q4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-4A0A140T8Q4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv3-4A0A140T8Q4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-4A0A140T8Q4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Igkv3-4A0A140T8Q4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-4A0A140T8Q4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-4A0A140T8Q4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-4A0A140T8Q4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC14.4□□□□□ -0.1
Igkv3-4A0A140T8Q4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-4A0A140T8Q4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv3-4A0A140T8Q4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv3-4A0A140T8Q4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv3-4A0A140T8Q4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Igkv3-4A0A140T8Q4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv3-4A0A140T8Q4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv3-4A0A140T8Q4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv3-4A0A140T8Q4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC14.38□□□□□ -0.11
Igkv3-4A0A140T8Q4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv3-4A0A140T8Q4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv3-4A0A140T8Q4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv3-4A0A140T8Q4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv3-4A0A140T8Q4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv3-4A0A140T8Q4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Igkv3-4A0A140T8Q4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Igkv3-4A0A140T8Q4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-4A0A140T8Q4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC14.36□□□□□ -0.11
Igkv3-4A0A140T8Q4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-4A0A140T8Q4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Igkv3-4A0A140T8Q4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv3-4A0A140T8Q4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv3-4A0A140T8Q4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv3-4A0A140T8Q4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv3-4A0A140T8Q4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv3-4A0A140T8Q4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv3-4A0A140T8Q4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Igkv3-4A0A140T8Q4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv3-4A0A140T8Q4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv3-4A0A140T8Q4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Igkv3-4A0A140T8Q4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv3-4A0A140T8Q4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv3-4A0A140T8Q4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms