Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav13d-4A0A0G2JFX3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav13d-4A0A0G2JFX3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Zfp131-205ENSMUST00000223812 663 ntBASIC15.85■□□□□ 0.13
Trav13d-4A0A0G2JFX3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-4A0A0G2JFX3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.83■□□□□ 0.13
Trav13d-4A0A0G2JFX3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13d-4A0A0G2JFX3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13d-4A0A0G2JFX3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.83■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.82■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-4A0A0G2JFX3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Gm9397-201ENSMUST00000200125 605 ntBASIC15.78■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-4A0A0G2JFX3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav13d-4A0A0G2JFX3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13d-4A0A0G2JFX3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Gm24970-201ENSMUST00000175582 82 ntBASIC15.76■□□□□ 0.11
Trav13d-4A0A0G2JFX3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15.76■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Gm30023-201ENSMUST00000197970 889 ntBASIC15.76■□□□□ 0.11
Trav13d-4A0A0G2JFX3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-4A0A0G2JFX3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.75■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav13d-4A0A0G2JFX3 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms