Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-52A0A0A6YXC3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Ighv1-52A0A0A6YXC3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-52A0A0A6YXC3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.65■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.65■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.65■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.61■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.61■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-52A0A0A6YXC3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.59■□□□□ 0.41
Ighv1-52A0A0A6YXC3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.59■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-52A0A0A6YXC3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv1-52A0A0A6YXC3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.58■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Ighv1-52A0A0A6YXC3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-52A0A0A6YXC3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.57■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.55■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.55■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-52A0A0A6YXC3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.54■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Gm4799-201ENSMUST00000095396 657 ntBASIC17.54■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.53■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ighv1-52A0A0A6YXC3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-52A0A0A6YXC3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-52A0A0A6YXC3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.49■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.48■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.48■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.47■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-52A0A0A6YXC3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.47■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-52A0A0A6YXC3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ighv1-52A0A0A6YXC3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Mir3960-201ENSMUST00000198213 73 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms