Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Gm28778A0A087WSK7 Gm11599-201ENSMUST00000118720 878 ntBASIC18.95■□□□□ 0.62
Gm28778A0A087WSK7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Gm28778A0A087WSK7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28778A0A087WSK7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.94■□□□□ 0.62
Gm28778A0A087WSK7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28778A0A087WSK7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28778A0A087WSK7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Gm28778A0A087WSK7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
Gm28778A0A087WSK7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28778A0A087WSK7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28778A0A087WSK7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28778A0A087WSK7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28778A0A087WSK7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.91■□□□□ 0.62
Gm28778A0A087WSK7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28778A0A087WSK7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.9■□□□□ 0.62
Gm28778A0A087WSK7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28778A0A087WSK7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Gm28778A0A087WSK7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28778A0A087WSK7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28778A0A087WSK7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28778A0A087WSK7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28778A0A087WSK7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28778A0A087WSK7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm28778A0A087WSK7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28778A0A087WSK7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Gm28778A0A087WSK7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Gm28778A0A087WSK7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.86■□□□□ 0.61
Gm28778A0A087WSK7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.86■□□□□ 0.61
Gm28778A0A087WSK7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.86■□□□□ 0.61
Gm28778A0A087WSK7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28778A0A087WSK7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28778A0A087WSK7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28778A0A087WSK7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28778A0A087WSK7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28778A0A087WSK7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28778A0A087WSK7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28778A0A087WSK7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28778A0A087WSK7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Gm28778A0A087WSK7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28778A0A087WSK7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Gm28778A0A087WSK7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm28778A0A087WSK7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Gm28778A0A087WSK7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm28778A0A087WSK7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm28778A0A087WSK7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28778A0A087WSK7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.82■□□□□ 0.6
Gm28778A0A087WSK7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm28778A0A087WSK7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Gm28778A0A087WSK7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Gm28778A0A087WSK7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28778A0A087WSK7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28778A0A087WSK7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28778A0A087WSK7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28778A0A087WSK7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28778A0A087WSK7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm28778A0A087WSK7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gm28778A0A087WSK7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28778A0A087WSK7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28778A0A087WSK7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm28778A0A087WSK7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm28778A0A087WSK7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28778A0A087WSK7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm28778A0A087WSK7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Gm28778A0A087WSK7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28778A0A087WSK7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28778A0A087WSK7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm28778A0A087WSK7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Gm28778A0A087WSK7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28778A0A087WSK7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28778A0A087WSK7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28778A0A087WSK7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28778A0A087WSK7 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.77■□□□□ 0.6
Gm28778A0A087WSK7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm28778A0A087WSK7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Gm28778A0A087WSK7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Gm28778A0A087WSK7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.76■□□□□ 0.59
Gm28778A0A087WSK7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm28778A0A087WSK7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gm28778A0A087WSK7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gm28778A0A087WSK7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gm28778A0A087WSK7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.75■□□□□ 0.59
Gm28778A0A087WSK7 Gm4799-201ENSMUST00000095396 657 ntBASIC18.75■□□□□ 0.59
Gm28778A0A087WSK7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gm28778A0A087WSK7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm28778A0A087WSK7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28778A0A087WSK7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28778A0A087WSK7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Gm28778A0A087WSK7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28778A0A087WSK7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28778A0A087WSK7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28778A0A087WSK7 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.74■□□□□ 0.59
Gm28778A0A087WSK7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm28778A0A087WSK7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm28778A0A087WSK7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28778A0A087WSK7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28778A0A087WSK7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm28778A0A087WSK7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Gm28778A0A087WSK7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.73■□□□□ 0.59
Gm28778A0A087WSK7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms