Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav6-7-dv9A0A075B639 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav6-7-dv9A0A075B639 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav6-7-dv9A0A075B639 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav6-7-dv9A0A075B639 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav6-7-dv9A0A075B639 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav6-7-dv9A0A075B639 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav6-7-dv9A0A075B639 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav6-7-dv9A0A075B639 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav6-7-dv9A0A075B639 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav6-7-dv9A0A075B639 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav6-7-dv9A0A075B639 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav6-7-dv9A0A075B639 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.56■□□□□ 0.88
Trav6-7-dv9A0A075B639 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trav6-7-dv9A0A075B639 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav6-7-dv9A0A075B639 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trav6-7-dv9A0A075B639 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav6-7-dv9A0A075B639 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav6-7-dv9A0A075B639 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trav6-7-dv9A0A075B639 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.54■□□□□ 0.88
Trav6-7-dv9A0A075B639 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav6-7-dv9A0A075B639 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.54■□□□□ 0.88
Trav6-7-dv9A0A075B639 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav6-7-dv9A0A075B639 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6-7-dv9A0A075B639 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6-7-dv9A0A075B639 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.53■□□□□ 0.88
Trav6-7-dv9A0A075B639 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6-7-dv9A0A075B639 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6-7-dv9A0A075B639 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6-7-dv9A0A075B639 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6-7-dv9A0A075B639 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav6-7-dv9A0A075B639 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trav6-7-dv9A0A075B639 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.52■□□□□ 0.87
Trav6-7-dv9A0A075B639 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trav6-7-dv9A0A075B639 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trav6-7-dv9A0A075B639 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav6-7-dv9A0A075B639 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.51■□□□□ 0.87
Trav6-7-dv9A0A075B639 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav6-7-dv9A0A075B639 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav6-7-dv9A0A075B639 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trav6-7-dv9A0A075B639 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6-7-dv9A0A075B639 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6-7-dv9A0A075B639 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Trav6-7-dv9A0A075B639 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6-7-dv9A0A075B639 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav6-7-dv9A0A075B639 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.48■□□□□ 0.87
Trav6-7-dv9A0A075B639 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.48■□□□□ 0.87
Trav6-7-dv9A0A075B639 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav6-7-dv9A0A075B639 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.48■□□□□ 0.87
Trav6-7-dv9A0A075B639 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.48■□□□□ 0.87
Trav6-7-dv9A0A075B639 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav6-7-dv9A0A075B639 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav6-7-dv9A0A075B639 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav6-7-dv9A0A075B639 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trav6-7-dv9A0A075B639 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav6-7-dv9A0A075B639 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav6-7-dv9A0A075B639 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav6-7-dv9A0A075B639 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trav6-7-dv9A0A075B639 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6-7-dv9A0A075B639 Gm6821-201ENSMUST00000107540 542 ntBASIC20.46■□□□□ 0.87
Trav6-7-dv9A0A075B639 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav6-7-dv9A0A075B639 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.46■□□□□ 0.87
Trav6-7-dv9A0A075B639 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6-7-dv9A0A075B639 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trav6-7-dv9A0A075B639 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trav6-7-dv9A0A075B639 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav6-7-dv9A0A075B639 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav6-7-dv9A0A075B639 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6-7-dv9A0A075B639 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6-7-dv9A0A075B639 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6-7-dv9A0A075B639 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6-7-dv9A0A075B639 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6-7-dv9A0A075B639 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Trav6-7-dv9A0A075B639 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6-7-dv9A0A075B639 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6-7-dv9A0A075B639 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6-7-dv9A0A075B639 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.42■□□□□ 0.86
Trav6-7-dv9A0A075B639 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6-7-dv9A0A075B639 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6-7-dv9A0A075B639 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.4■□□□□ 0.86
Trav6-7-dv9A0A075B639 Gm37136-201ENSMUST00000194368 194 ntBASIC20.4■□□□□ 0.86
Trav6-7-dv9A0A075B639 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav6-7-dv9A0A075B639 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trav6-7-dv9A0A075B639 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav6-7-dv9A0A075B639 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav6-7-dv9A0A075B639 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6-7-dv9A0A075B639 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6-7-dv9A0A075B639 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6-7-dv9A0A075B639 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6-7-dv9A0A075B639 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6-7-dv9A0A075B639 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6-7-dv9A0A075B639 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-7-dv9A0A075B639 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-7-dv9A0A075B639 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-7-dv9A0A075B639 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-7-dv9A0A075B639 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-7-dv9A0A075B639 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-7-dv9A0A075B639 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-7-dv9A0A075B639 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.36■□□□□ 0.85
Trav6-7-dv9A0A075B639 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms