Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-6A0A075B603 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-6A0A075B603 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-6A0A075B603 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-6A0A075B603 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-6A0A075B603 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-6A0A075B603 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-6A0A075B603 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-6A0A075B603 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Trav6-6A0A075B603 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav6-6A0A075B603 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-6A0A075B603 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav6-6A0A075B603 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-6A0A075B603 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6-6A0A075B603 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.21■□□□□ 0.35
Trav6-6A0A075B603 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Trav6-6A0A075B603 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav6-6A0A075B603 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav6-6A0A075B603 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-6A0A075B603 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav6-6A0A075B603 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6-6A0A075B603 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-6A0A075B603 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-6A0A075B603 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav6-6A0A075B603 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-6A0A075B603 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-6A0A075B603 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Trav6-6A0A075B603 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav6-6A0A075B603 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-6A0A075B603 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-6A0A075B603 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-6A0A075B603 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.17■□□□□ 0.34
Trav6-6A0A075B603 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav6-6A0A075B603 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-6A0A075B603 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-6A0A075B603 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-6A0A075B603 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.15■□□□□ 0.34
Trav6-6A0A075B603 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-6A0A075B603 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav6-6A0A075B603 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trav6-6A0A075B603 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-6A0A075B603 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Trav6-6A0A075B603 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trav6-6A0A075B603 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.14■□□□□ 0.33
Trav6-6A0A075B603 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-6A0A075B603 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.13■□□□□ 0.33
Trav6-6A0A075B603 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-6A0A075B603 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-6A0A075B603 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-6A0A075B603 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-6A0A075B603 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.12■□□□□ 0.33
Trav6-6A0A075B603 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-6A0A075B603 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.12■□□□□ 0.33
Trav6-6A0A075B603 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-6A0A075B603 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-6A0A075B603 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-6A0A075B603 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-6A0A075B603 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav6-6A0A075B603 Zfp131-205ENSMUST00000223812 663 ntBASIC17.11■□□□□ 0.33
Trav6-6A0A075B603 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav6-6A0A075B603 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-6A0A075B603 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.1■□□□□ 0.33
Trav6-6A0A075B603 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav6-6A0A075B603 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-6A0A075B603 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-6A0A075B603 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-6A0A075B603 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav6-6A0A075B603 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-6A0A075B603 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav6-6A0A075B603 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-6A0A075B603 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-6A0A075B603 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-6A0A075B603 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-6A0A075B603 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav6-6A0A075B603 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-6A0A075B603 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-6A0A075B603 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav6-6A0A075B603 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trav6-6A0A075B603 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-6A0A075B603 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-6A0A075B603 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-6A0A075B603 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-6A0A075B603 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-6A0A075B603 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-6A0A075B603 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-6A0A075B603 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.06■□□□□ 0.32
Trav6-6A0A075B603 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Trav6-6A0A075B603 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-6A0A075B603 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-6A0A075B603 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Trav6-6A0A075B603 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-6A0A075B603 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-6A0A075B603 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.05■□□□□ 0.32
Trav6-6A0A075B603 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav6-6A0A075B603 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-6A0A075B603 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav6-6A0A075B603 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav6-6A0A075B603 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-6A0A075B603 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6-6A0A075B603 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms