Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 AC004062.1-201ENST00000509926 645 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AC010625.1-201ENST00000511296 403 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 MIR5092-201ENST00000583139 88 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 RPP40P2-201ENST00000603596 712 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 VIS1.1-201ENST00000610517 203 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AC040168.1-201ENST00000623594 991 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 AC010608.3-201ENST00000625048 527 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 MIR1291-201ENST00000627649 87 ntBASIC3.07□□□□□ -1.92
USP16Q9Y5T5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
USP16Q9Y5T5 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 SNORD21-201ENST00000383953 95 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 Y_RNA.472-201ENST00000384322 102 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 RNU2-42P-201ENST00000410697 113 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 USP9YP24-201ENST00000434374 697 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC092427.1-201ENST00000439177 601 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 USP9YP17-201ENST00000444617 696 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC104389.3-201ENST00000445629 235 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 ZNF886P-201ENST00000450781 723 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 DUXAP8-207ENST00000456786 622 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 snoU13.26-201ENST00000459452 105 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AL024509.2-201ENST00000493462 493 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC005832.3-201ENST00000537929 631 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 HIGD1AP17-201ENST00000554576 276 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC106754.1-201ENST00000562632 1513 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 MIR4648-201ENST00000580107 72 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC061975.8-201ENST00000587058 721 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC004987.4-201ENST00000603383 338 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC104763.2-201ENST00000604179 382 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AP000787.2-201ENST00000604432 568 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 DUXAP10-204ENST00000612052 616 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC018755.4-201ENST00000619715 454 ntBASIC3.06□□□□□ -1.92
USP16Q9Y5T5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
USP16Q9Y5T5 AC099786.3-201ENST00000565735 1410 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 DEFB109C-201ENST00000382575 264 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 DEFB109B-201ENST00000382656 264 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 RNU6-1122P-201ENST00000384449 107 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 RNU1-101P-201ENST00000391171 127 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 MTND4P13-201ENST00000402078 1023 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AL590084.1-201ENST00000407885 387 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 BX276092.3-201ENST00000424182 230 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 MTND2P20-201ENST00000440805 661 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 ST13P20-201ENST00000447996 1065 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC093392.2-201ENST00000450682 337 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 SLC2A13P1-201ENST00000531560 322 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AP000873.5-201ENST00000533906 236 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 EEF1B2P4-201ENST00000551398 348 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AADACP1-206ENST00000561502 1193 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 BNIP3P26-201ENST00000600827 554 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 BNIP3P39-201ENST00000601077 554 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AL160237.3-201ENST00000604114 1013 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC010738.1-201ENST00000604970 987 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC055876.5-201ENST00000605667 259 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC080013.4-201ENST00000607624 649 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC024933.1-201ENST00000608472 348 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC016597.2-201ENST00000613256 341 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC079228.1-201ENST00000624774 1049 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC120349.2-201ENST00000625002 298 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 AC244517.1-201ENST00000606030 2086 ntBASIC3.05□□□□□ -1.92
USP16Q9Y5T5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP16Q9Y5T5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
USP16Q9Y5T5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP16Q9Y5T5 RNU6-560P-201ENST00000364007 108 ntBASIC3.04□□□□□ -1.92
USP16Q9Y5T5 RNU4-68P-201ENST00000364314 141 ntBASIC3.04□□□□□ -1.92
USP16Q9Y5T5 AC016769.3-201ENST00000396562 315 ntBASIC3.04□□□□□ -1.92
USP16Q9Y5T5 AL161449.1-201ENST00000414531 1199 ntBASIC3.04□□□□□ -1.92
USP16Q9Y5T5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.04□□□□□ -1.92
USP16Q9Y5T5 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.04□□□□□ -1.92
USP16Q9Y5T5 MTND4P6-201ENST00000438297 472 ntBASIC3.04□□□□□ -1.92
USP16Q9Y5T5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.04□□□□□ -1.92
USP16Q9Y5T5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
USP16Q9Y5T5 snoU13.4-201ENST00000458916 104 ntBASIC3.04□□□□□ -1.92
USP16Q9Y5T5 AC011979.1-201ENST00000472300 483 ntBASIC3.04□□□□□ -1.92
USP16Q9Y5T5 OR4G11P-201ENST00000492842 939 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms