Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 AC123904.2-201ENST00000548059 300 ntBASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 MIR5186-201ENST00000577504 120 ntBASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 MIR5047-201ENST00000579212 100 ntBASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 MIR4286-201ENST00000580651 93 ntBASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 MIR3682-201ENST00000581338 84 ntBASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 NRBF2P1-201ENST00000587407 859 ntBASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 AC008752.3-201ENST00000588113 712 ntBASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 AC009159.1-201ENST00000618386 642 ntBASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 MIR6075-201ENST00000620782 95 ntBASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 AC130650.2-201ENST00000618736 2403 ntBASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PCDHGB1Q9Y5G3 NUP58P1-201ENST00000502546 1738 ntBASIC3.53□□□□□ -1.85
PCDHGB1Q9Y5G3 SAGE4P-201ENST00000442271 3381 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 GABPAP-201ENST00000419271 1356 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 MTND4P29-201ENST00000503122 1372 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC092326.2-201ENST00000624772 1561 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 RNU5E-1-201ENST00000362477 120 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 RNU6-181P-201ENST00000363225 107 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 RNU6-1226P-201ENST00000384317 107 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC068050.1-201ENST00000394891 380 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 HSPE1P26-201ENST00000405341 275 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC133104.1-201ENST00000429100 218 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 RPL22P17-201ENST00000438729 315 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 SDCBPP1-201ENST00000440192 890 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 TRBV26-201ENST00000456572 344 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 RNU6-420P-201ENST00000458780 107 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 RPL37P6-202ENST00000464216 403 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AP000852.1-201ENST00000472460 573 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC087879.1-201ENST00000474343 374 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC084198.1-201ENST00000477747 402 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 RNU6-445P-201ENST00000516949 107 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 MTND1P35-201ENST00000526739 508 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AL512360.1-201ENST00000555346 234 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AL845331.3-202ENST00000562856 261 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC025678.1-201ENST00000567861 338 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC245014.2-201ENST00000603689 287 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AL359999.1-201ENST00000604513 294 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC007363.1-201ENST00000604736 620 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AL137849.1-201ENST00000604767 169 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AC246785.4-201ENST00000605374 287 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 AL390208.1-201ENST00000605885 644 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGB1Q9Y5G3 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 MIR208A-201ENST00000362287 71 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 RNU6-525P-201ENST00000363685 104 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 Y_RNA.381-201ENST00000365666 102 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 RNU6-730P-201ENST00000383954 104 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 AL024474.1-201ENST00000404655 591 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 RNU6-908P-201ENST00000410160 94 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 AL359704.1-201ENST00000411586 781 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 HSPE1P12-201ENST00000412576 301 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 RPL31P2-201ENST00000413849 377 ntBASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGB1Q9Y5G3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 285.3 ms