Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AL157700.1-201ENST00000561973 1432 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 AC130650.2-201ENST00000618736 2403 ntBASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTDP1Q9Y5B0 PABPC1P7-201ENST00000413177 1513 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 RNU4-1-201ENST00000363925 141 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 RNA5SP97-201ENST00000365006 84 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 SNORA69-201ENST00000383895 132 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 RNU6-1226P-201ENST00000384317 107 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 Y_RNA.548-201ENST00000384656 105 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 MIR200C-201ENST00000384980 68 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 PTMAP2-201ENST00000397627 327 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 ELOCP4-201ENST00000420090 333 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC006548.1-201ENST00000427470 102 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AL049734.2-201ENST00000441066 616 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC139783.2-201ENST00000504847 1145 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 RNU6-1153P-201ENST00000516760 105 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 RNU7-143P-201ENST00000516781 65 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 RNU6-835P-201ENST00000516974 104 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC008694.2-201ENST00000517591 306 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC107934.1-201ENST00000522215 217 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AP000907.2-201ENST00000530827 353 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 MIR4429-201ENST00000580105 73 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 MIR4795-201ENST00000584182 89 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC013553.2-201ENST00000604244 589 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AL391813.2-201ENST00000609113 322 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AL355472.4-201ENST00000610233 626 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 DISC2.1-201ENST00000612827 205 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC126177.8-201ENST00000618339 1015 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AL354798.1-201ENST00000622505 329 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 CR381572.1-201ENST00000625098 102 ntBASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTDP1Q9Y5B0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AP001486.2-201ENST00000561652 5113 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC105074.1-201ENST00000623380 3095 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 RNU6-845P-201ENST00000362578 103 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 SSXP10-201ENST00000402595 565 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 RNA5SP104-201ENST00000410989 118 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 RPS15AP12-201ENST00000419498 388 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC007283.2-201ENST00000424739 197 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AL590233.1-201ENST00000430017 456 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC104073.1-201ENST00000451988 151 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 RNU6-261P-201ENST00000459506 102 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AL136126.1-201ENST00000473603 402 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 PPIAP15-201ENST00000479662 484 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 RPL23AP41-201ENST00000484754 458 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC093767.1-201ENST00000504523 156 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC093677.1-201ENST00000514414 678 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC104057.1-201ENST00000515547 497 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 RNU2-58P-201ENST00000516403 183 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC022616.3-201ENST00000523940 148 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC069240.1-201ENST00000548774 375 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC055876.1-202ENST00000567053 138 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 MIR3158-1-201ENST00000583596 81 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC018638.8-201ENST00000588755 281 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 MIR4727-201ENST00000622232 55 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 FRG1KP-201ENST00000623592 341 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 AC055839.1-201ENST00000634467 498 ntBASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CTDP1Q9Y5B0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CTDP1Q9Y5B0 EXOC5P1-201ENST00000510543 1969 ntBASIC4.65□□□□□ -1.66
CTDP1Q9Y5B0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 Y_RNA.157-201ENST00000363638 102 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 RNY4P16-201ENST00000364768 94 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 RNU6-169P-201ENST00000365336 107 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 SNORD6-201ENST00000365444 73 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 MIR670-201ENST00000390142 98 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 FAT1P1-201ENST00000406588 507 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 RNU2-9P-201ENST00000410194 145 ntBASIC4.65□□□□□ -1.67
CTDP1Q9Y5B0 RNU6-373P-201ENST00000411247 98 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms