Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 USP8P1-201ENST00000494673 3183 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 RNA5SP124-201ENST00000362739 110 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 RNA5SP399-201ENST00000364003 117 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 RNU6-282P-201ENST00000365357 103 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 Y_RNA.409-201ENST00000383990 98 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 RNU6-339P-201ENST00000384310 107 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 SNORD51-201ENST00000384320 80 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 RNU6-780P-201ENST00000391030 104 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AC127526.1-201ENST00000417526 366 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 MTCO1P20-201ENST00000425366 358 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AC006548.1-201ENST00000427470 102 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 HMGB1P31-201ENST00000437242 427 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 RPL21P103-201ENST00000479921 488 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 RN7SKP234-201ENST00000517173 224 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 IGKV2D-36-201ENST00000518643 226 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 IGKV2-23-201ENST00000518729 323 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AC022968.1-201ENST00000567372 442 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 MIR3167-201ENST00000579623 85 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 MIR3146-201ENST00000580367 79 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 UBE2L4-201ENST00000587688 464 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AL391646.1-201ENST00000603860 190 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AC084757.4-201ENST00000616350 526 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AL158801.5-201ENST00000623123 465 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AC091925.2-201ENST00000625059 256 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 CR381572.1-201ENST00000625098 102 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.18□□□□□ -1.74
SSX2IPQ9Y2D8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 CR848007.1-201ENST00000442354 1699 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 RNU4-1-201ENST00000363925 141 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 SNORA70.4-201ENST00000365509 134 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 RHEBP3-201ENST00000411920 351 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AL591419.1-201ENST00000427423 339 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AC137499.1-201ENST00000427602 88 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AL136097.1-201ENST00000456945 913 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 RNU6-27P-201ENST00000516146 107 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AL121579.1-201ENST00000555129 305 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 SUB1P2-201ENST00000556401 297 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 BNIP3P30-201ENST00000601184 574 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AL391813.2-201ENST00000609113 322 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AL590099.1-201ENST00000615276 138 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AL391261.4-201ENST00000616012 481 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AL034408.1-202ENST00000636088 415 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 ZNF285B-201ENST00000561698 1767 ntBASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX2IPQ9Y2D8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AC138915.3-201ENST00000562908 1389 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 OR5J1P-201ENST00000313544 939 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 MIR423-201ENST00000362201 94 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 SNORA63.1-201ENST00000362493 131 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 RNU6-1090P-201ENST00000364065 94 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 SNORA73.2-201ENST00000364946 201 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 RNU6-114P-201ENST00000384704 105 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 RPS3AP24-201ENST00000407896 734 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 SNORA11.1-201ENST00000408133 129 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 CCDC58P2-201ENST00000417131 366 ntBASIC4.16□□□□□ -1.74
SSX2IPQ9Y2D8 HMGB3P20-201ENST00000417997 600 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms