Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXA2Q9Y261 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.85□□□□□ -1.95
FOXA2Q9Y261 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.85□□□□□ -1.95
FOXA2Q9Y261 AL356432.3-201ENST00000568952 465 ntBASIC2.85□□□□□ -1.95
FOXA2Q9Y261 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXA2Q9Y261 AP001981.2-201ENST00000603241 418 ntBASIC2.85□□□□□ -1.95
FOXA2Q9Y261 MTCYBP22-201ENST00000603788 447 ntBASIC2.85□□□□□ -1.95
FOXA2Q9Y261 AL121772.2-201ENST00000614331 297 ntBASIC2.85□□□□□ -1.95
FOXA2Q9Y261 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
FOXA2Q9Y261 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA2Q9Y261 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA2Q9Y261 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA2Q9Y261 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
FOXA2Q9Y261 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 RNU5F-7P-201ENST00000363696 115 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 RNA5SP51-201ENST00000364750 119 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 MIR134-201ENST00000385258 73 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 MIR767-201ENST00000390228 109 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 RPL7P60-201ENST00000397636 735 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AL359634.1-202ENST00000404721 284 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 RPL7P8-201ENST00000411964 730 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 ELOCP17-201ENST00000414751 326 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AL389915.1-201ENST00000422463 466 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC244035.1-201ENST00000430042 390 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 TIMM9P1-201ENST00000436122 256 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC013267.1-201ENST00000458227 267 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 RNU7-23P-201ENST00000459465 62 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC010401.1-201ENST00000463867 348 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 RPL23AP67-201ENST00000465341 474 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC068587.2-201ENST00000478386 781 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC021205.2-201ENST00000480069 347 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 RNU6-927P-201ENST00000516199 100 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 RNU6-1003P-201ENST00000517099 105 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 DPPA3P3-201ENST00000603842 430 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC008277.2-201ENST00000605196 797 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC063944.3-201ENST00000609969 533 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC245517.5-201ENST00000611529 162 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 CR392039.5-201ENST00000623201 510 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC093591.3-201ENST00000634516 308 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC006927.3-201ENST00000638789 384 ntBASIC2.84□□□□□ -1.95
FOXA2Q9Y261 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
FOXA2Q9Y261 AC099654.7-201ENST00000635788 2127 ntBASIC2.84□□□□□ -1.96
FOXA2Q9Y261 ZNF285B-201ENST00000561698 1767 ntBASIC2.84□□□□□ -1.96
FOXA2Q9Y261 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
FOXA2Q9Y261 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
FOXA2Q9Y261 GABRG2-229ENST00000641017 3628 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.83□□□□□ -1.96
FOXA2Q9Y261 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.83□□□□□ -1.96
FOXA2Q9Y261 FTLP6-201ENST00000355274 422 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 MIR30E-201ENST00000362104 92 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 RNU6-500P-201ENST00000362349 107 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AP002088.1-201ENST00000382740 395 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 SNORA5A-201ENST00000384111 134 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 PTMAP2-201ENST00000397627 327 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 RPS20P2-201ENST00000402520 389 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AP000907.1-201ENST00000428428 510 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 MTND5P25-201ENST00000430499 799 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AL714022.1-201ENST00000439897 151 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 RPL23AP58-201ENST00000440453 469 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.83□□□□□ -1.96
FOXA2Q9Y261 GDI2P2-201ENST00000445131 608 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.83□□□□□ -1.96
FOXA2Q9Y261 RPS4XP2-201ENST00000458402 793 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AC091179.1-201ENST00000461606 579 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 RPL7P5-201ENST00000471472 736 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AC116337.2-201ENST00000477662 156 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AC004263.1-201ENST00000479327 332 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AC093663.1-201ENST00000497190 394 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 DSTNP2-201ENST00000504533 515 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AC110768.1-201ENST00000509222 400 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 SAP18P1-201ENST00000512058 390 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 AC114797.1-201ENST00000514003 728 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 RNU6-1129P-201ENST00000515964 104 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 RNU1-95P-201ENST00000516357 160 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 RNU1-128P-201ENST00000516704 160 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.83□□□□□ -1.96
FOXA2Q9Y261 TRMT10BP1-201ENST00000519377 943 ntBASIC2.83□□□□□ -1.96
FOXA2Q9Y261 NDUFB9P3-201ENST00000521269 501 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms