Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC009229.4-201ENST00000623854 1947 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC010266.2-201ENST00000564741 3255 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 Y_RNA.187-201ENST00000363918 113 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 RNU6-1026P-201ENST00000384465 108 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 Y_RNA.608-201ENST00000410647 95 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AL645937.1-202ENST00000421799 937 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 SLC31A1P1-201ENST00000451221 567 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 RNU6-764P-201ENST00000516396 105 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC090151.1-201ENST00000520784 730 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC055876.1-202ENST00000567053 138 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 ATP5F1P7-201ENST00000567330 760 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC141257.3-201ENST00000572906 215 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 MIR4307-201ENST00000582802 84 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 DPPA3P3-201ENST00000603842 430 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AP001330.4-201ENST00000604350 154 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC112191.3-201ENST00000604371 277 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC243654.2-201ENST00000612843 443 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 U2.22-201ENST00000636441 106 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC138649.5-201ENST00000637456 137 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 CDY11P-201ENST00000447168 1651 ntBASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC2.94□□□□□ -1.94
NOTCH3Q9UM47 Y_RNA.25-201ENST00000362528 102 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RNU6-98P-201ENST00000384173 107 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 MIR128-1-201ENST00000384921 82 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RNU6-1300P-201ENST00000391046 108 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 MIR1284-201ENST00000408337 120 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 OR51A3P-201ENST00000413596 924 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC009302.1-201ENST00000417147 390 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 DUTP6-201ENST00000425573 462 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 HSPE1P16-201ENST00000426640 348 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 MTCO1P27-201ENST00000448269 226 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC099563.1-201ENST00000456086 418 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 MTCO1P42-201ENST00000457379 726 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RPL21P11-201ENST00000461458 483 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC106707.2-201ENST00000484182 374 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC104619.4-201ENST00000510773 249 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 PPBPP1-201ENST00000510807 373 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 Y_RNA.673-201ENST00000516306 88 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 FRG2DP-202ENST00000566967 323 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RNU1-30P-201ENST00000606575 163 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AL161734.1-201ENST00000609720 557 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 MTND4LP32-201ENST00000636111 270 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AL442128.2-201ENST00000620246 1824 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 MTCO1P14-201ENST00000441695 1559 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RNU6-543P-201ENST00000362576 108 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 RNU6-462P-201ENST00000362659 105 ntBASIC2.93□□□□□ -1.94
NOTCH3Q9UM47 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms