Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC104662.1-201ENST00000604448 511 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 IGHV3-29-201ENST00000604817 344 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 FAM27B-201ENST00000610601 213 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AL713922.2-201ENST00000619384 716 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC110801.1-201ENST00000623590 212 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC103710.2-202ENST00000641454 2853 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 MTCO1P12-201ENST00000414273 1543 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AL138820.1-201ENST00000617901 5305 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 RNU6-837P-201ENST00000391056 108 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 RN7SKP158-201ENST00000410453 326 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 RNU6-1304P-201ENST00000411374 106 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 RPL37P10-201ENST00000412884 288 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AC114755.2-201ENST00000413520 361 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AL137014.1-201ENST00000420490 1226 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 Z82205.1-201ENST00000428456 297 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AC004938.1-201ENST00000438468 308 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AL451050.1-201ENST00000450126 415 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 RNU7-152P-201ENST00000458982 64 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 RPS3AP41-201ENST00000462701 778 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AC010631.1-201ENST00000474150 156 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 RPL7P43-201ENST00000478876 753 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 RPL21P93-201ENST00000480465 489 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 TRBVA-201ENST00000498804 316 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 SCARNA22-201ENST00000503991 125 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 APOOP3-201ENST00000536787 586 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AL121576.1-201ENST00000556055 276 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 MIR4790-201ENST00000577799 79 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AC006270.2-201ENST00000578523 652 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AL034351.1-201ENST00000605288 668 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AL355802.3-201ENST00000607571 545 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 MIR6130-201ENST00000619419 109 ntBASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BRPF3Q9ULD4 AL359922.3-201ENST00000624779 1670 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 AC116096.1-201ENST00000566804 2314 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 RNU6-1160P-201ENST00000384546 104 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 EIF4E2P1-201ENST00000393781 255 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 RNA5SP113-201ENST00000410486 84 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 RNU6-370P-201ENST00000411008 104 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 GPM6BP2-201ENST00000432046 144 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 MRPS18BP2-201ENST00000434310 759 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 RPL21P112-201ENST00000434403 463 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 USP9YP7-201ENST00000436723 430 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 GPM6BP1-201ENST00000446387 144 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 USP9YP32-201ENST00000452432 430 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 AP000873.1-201ENST00000463987 400 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 PPBPP1-201ENST00000510807 373 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 RN7SKP24-201ENST00000515888 284 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 RNU6-256P-201ENST00000516747 97 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 Y_RNA.711-201ENST00000516993 102 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 RNU6-685P-201ENST00000517088 95 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 AP000676.2-201ENST00000529711 301 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 AP001880.2-201ENST00000538233 448 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 AC051619.2-201ENST00000559063 397 ntBASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.59□□□□□ -1.51
BRPF3Q9ULD4 AC209154.1-201ENST00000582156 337 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms