Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.04□□□□□ -1.92
CTNNA3Q9UI47 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 RNA5SP68-201ENST00000363885 119 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 U6.112-201ENST00000384129 70 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 MIR27B-201ENST00000385129 97 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AC080125.1-201ENST00000414888 684 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 SNORA48.10-201ENST00000516965 160 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 EEF1A1P37-201ENST00000522748 715 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AC006518.2-201ENST00000542513 940 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AL512310.1-201ENST00000548639 172 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AC090888.1-201ENST00000561335 1141 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 MIR4524B-201ENST00000581569 115 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AC105224.1-201ENST00000587055 421 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AP001542.2-201ENST00000593141 364 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AC005776.1-201ENST00000603164 290 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 UCA1.1-201ENST00000620952 75 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AC090772.4-201ENST00000623599 362 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.03□□□□□ -1.92
CTNNA3Q9UI47 ZNF271P-202ENST00000465539 1970 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC010680.1-201ENST00000590024 3590 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 RNU2-72P-201ENST00000411175 163 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 BEND7P1-201ENST00000422058 457 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 RAC1P8-201ENST00000427086 527 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 TOMM20P4-201ENST00000427861 435 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC092427.1-202ENST00000430569 476 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC090774.1-201ENST00000435925 246 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 BOLA3P3-201ENST00000505182 232 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 COX7A2P2-201ENST00000505291 250 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 SNORA31.15-201ENST00000516771 132 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC234778.2-201ENST00000566241 354 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 SNORD53-201ENST00000579969 78 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 VN1R78P-201ENST00000597393 564 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 MIR6817-201ENST00000615588 66 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC073308.1-201ENST00000623696 305 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 AC080188.3-201ENST00000624842 748 ntBASIC3.02□□□□□ -1.93
CTNNA3Q9UI47 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 RNU6-492P-201ENST00000363035 104 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 RNU6-236P-201ENST00000363886 106 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 MIR135A2-201ENST00000384854 100 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 MIR767-201ENST00000390228 109 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 RNA5SP181-201ENST00000410246 98 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AC027644.1-201ENST00000419595 298 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 THAP5P1-201ENST00000439089 262 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AC113420.1-201ENST00000507903 571 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 RNU6-928P-201ENST00000516876 104 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 CKS1BP7-201ENST00000522230 235 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 RPAP2P1-201ENST00000603626 1168 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AC084824.5-201ENST00000612009 413 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AL450472.3-201ENST00000615578 367 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AC078880.5-201ENST00000617845 421 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 U4.3-201ENST00000621047 82 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AC011330.2-201ENST00000621680 635 ntBASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.01□□□□□ -1.93
CTNNA3Q9UI47 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms