Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ZNF886P-201ENST00000450781 723 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 SUMO2P2-201ENST00000456482 255 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 SNORA31.1-201ENST00000515993 133 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 SNORA31.5-201ENST00000516190 133 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 RN7SKP31-201ENST00000516354 278 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 RPL7P20-201ENST00000520308 745 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 HSPA8P13-201ENST00000523715 472 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AL132657.2-201ENST00000564417 358 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AC245036.5-201ENST00000596330 847 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AL109653.1-201ENST00000603091 248 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AL160237.3-201ENST00000604114 1013 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AC069304.2-201ENST00000605154 435 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AL158163.2-201ENST00000619110 700 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AC018755.4-201ENST00000619715 454 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AL391262.2-201ENST00000622466 494 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AC090772.4-201ENST00000623599 362 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 AC010608.3-201ENST00000625048 527 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 MIR1322-201ENST00000638013 71 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 API5P2-201ENST00000397055 1498 ntBASIC3.33□□□□□ -1.88
NPC1L1Q9UHC9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AL591034.1-201ENST00000407447 340 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 MTCO2P17-201ENST00000424336 677 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 MTND4LP10-201ENST00000435146 291 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 HIGD1AP11-201ENST00000438361 280 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 RABEPKP1-201ENST00000440529 1026 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 OR6K1P-201ENST00000456766 971 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 RPS15AP17-201ENST00000470598 390 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 RPS27P27-201ENST00000498779 255 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 UBE2V1P12-201ENST00000503954 474 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AADACP1-206ENST00000561502 1193 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 MIR4769-201ENST00000584126 77 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 BDH2P1-201ENST00000602288 736 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 VIS1.1-201ENST00000610517 203 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AL359198.2-201ENST00000611836 194 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AC243773.3-201ENST00000613270 256 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AC109809.1-201ENST00000619665 545 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AC022960.3-201ENST00000619794 441 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 AC091925.2-201ENST00000625059 256 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.32□□□□□ -1.88
NPC1L1Q9UHC9 MAPK10-322ENST00000641485 4530 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 SNORA25.6-201ENST00000364121 118 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 RNU4-68P-201ENST00000364314 141 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 SNORA41-201ENST00000384675 132 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 NANOGP2-201ENST00000435391 727 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AL445669.2-201ENST00000454425 421 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 MTCO3P11-201ENST00000455103 774 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 RPS23P3-201ENST00000470993 430 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC114322.1-201ENST00000506771 926 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 HMGB1P28-201ENST00000507778 552 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AP003122.3-201ENST00000526316 255 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC126177.3-201ENST00000551839 688 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC087481.2-201ENST00000565492 330 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC099786.3-201ENST00000565735 1410 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 MIR4524B-201ENST00000581569 115 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC144521.1-201ENST00000607148 956 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC092953.2-201ENST00000608000 699 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AL390240.1-201ENST00000612950 384 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AL136164.4-201ENST00000625013 2135 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 ZNF658B-202ENST00000615961 3375 ntBASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
NPC1L1Q9UHC9 AC069528.2-201ENST00000624849 1991 ntBASIC3.3□□□□□ -1.88
NPC1L1Q9UHC9 AC097714.1-201ENST00000511272 1647 ntBASIC3.3□□□□□ -1.88
NPC1L1Q9UHC9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.3□□□□□ -1.88
NPC1L1Q9UHC9 AL356473.1-201ENST00000406203 1408 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms