Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU2-10P-201ENST00000516375 211 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 RNU6-445P-201ENST00000516949 107 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 MTND4LP26-201ENST00000518144 282 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
COL20A1Q9P218 MTCYBP41-201ENST00000528913 1123 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 AC124947.2-202ENST00000552735 133 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 TPRKBP2-201ENST00000565969 475 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 MIR3944-201ENST00000581277 108 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 FRG1KP-201ENST00000623592 341 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 AL160394.1-201ENST00000624765 724 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 LRRC77P-213ENST00000637727 880 ntBASIC4.14□□□□□ -1.75
COL20A1Q9P218 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL20A1Q9P218 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL20A1Q9P218 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
COL20A1Q9P218 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
COL20A1Q9P218 AC005832.2-201ENST00000538921 1430 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 BDP1P-201ENST00000582658 1990 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 MTCO1P12-201ENST00000414273 1543 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 OR4G2P-201ENST00000328113 903 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 RNU6-173P-201ENST00000364215 104 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 SNORA7.2-201ENST00000364446 145 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 RPL17P50-201ENST00000396131 546 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 UBE2FP1-201ENST00000416536 447 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 SSXP9-201ENST00000417503 292 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 MTCO2P11-201ENST00000431069 680 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 ATP5JP1-201ENST00000431631 322 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC073063.1-201ENST00000434352 607 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 RPL21P112-201ENST00000434403 463 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 NPM1P49-201ENST00000448027 714 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC008155.2-201ENST00000464337 397 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 RPS15AP36-201ENST00000492022 382 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC078817.1-201ENST00000492623 435 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC079382.1-201ENST00000493346 557 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC139783.2-201ENST00000504847 1145 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 VN1R104P-201ENST00000505115 1009 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC022616.3-201ENST00000523940 148 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AP003072.2-201ENST00000527756 676 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 FAM92A1P1-201ENST00000528023 890 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 SRGNP1-201ENST00000603392 451 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AL022099.1-201ENST00000604551 712 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AL450472.3-201ENST00000615578 367 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 MIR7975-201ENST00000619350 68 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 AC091905.1-201ENST00000624400 311 ntBASIC4.13□□□□□ -1.75
COL20A1Q9P218 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL20A1Q9P218 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
COL20A1Q9P218 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
COL20A1Q9P218 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 AL157700.1-201ENST00000561973 1432 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL20A1Q9P218 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL20A1Q9P218 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL20A1Q9P218 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 Y_RNA.1-201ENST00000352915 104 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL20A1Q9P218 RNU6-1097P-201ENST00000363586 107 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 MIR218-2-201ENST00000385006 110 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 MTCO3P40-201ENST00000392516 676 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC017079.2-201ENST00000416102 485 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 HMGB3P20-201ENST00000417997 600 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 MTCYBP5-201ENST00000423752 1135 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC007283.2-201ENST00000424739 197 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 AL162389.1-201ENST00000449233 177 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC140076.1-201ENST00000449897 361 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 SNORD105B-201ENST00000458770 79 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 snoU13.24-201ENST00000458998 104 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC010285.1-201ENST00000470580 392 ntBASIC4.12□□□□□ -1.75
COL20A1Q9P218 AC023598.1-201ENST00000472521 361 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms