Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
NCKIPSDQ9NZQ3 ELF2P3-201ENST00000445099 1506 ntBASIC3.79□□□□□ -1.8
NCKIPSDQ9NZQ3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NCKIPSDQ9NZQ3 AC092125.1-201ENST00000562568 1995 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 OR5J1P-201ENST00000313544 939 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 RNY4P34-201ENST00000364779 95 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 U3.20-201ENST00000390909 217 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC078974.1-201ENST00000411597 223 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 TOMM22P1-201ENST00000418578 312 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 BEND7P1-201ENST00000422058 457 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 USP9YP18-201ENST00000425912 695 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AL451074.3-201ENST00000437709 472 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AL121871.1-201ENST00000443413 436 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 RPL17P49-201ENST00000443728 411 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC013267.1-201ENST00000458227 267 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 RPL31P58-201ENST00000469001 379 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 RPS3AP17-201ENST00000472594 777 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC084198.1-201ENST00000477747 402 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC093278.1-201ENST00000494700 600 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 SNORA70.14-201ENST00000516205 110 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC103783.1-201ENST00000520506 373 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC109635.4-202ENST00000531666 412 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC018630.1-201ENST00000541376 925 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 SETP2-201ENST00000553886 926 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC006960.3-201ENST00000561845 705 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC006270.2-201ENST00000578523 652 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 OR4K8P-201ENST00000578842 1048 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC006254.3-201ENST00000603353 884 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AL391813.2-201ENST00000609113 322 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC090970.3-201ENST00000612566 866 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AL158209.2-201ENST00000619266 216 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AL732618.1-201ENST00000623251 301 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC124864.2-201ENST00000624736 186 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 PISRT1-201ENST00000626175 531 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC110994.2-201ENST00000635481 492 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 AC009093.8-201ENST00000641769 292 ntBASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NCKIPSDQ9NZQ3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.78□□□□□ -1.81
NCKIPSDQ9NZQ3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 CEP170P1-201ENST00000502249 4587 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 FARSBP1-201ENST00000435808 1778 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AP001350.1-201ENST00000601906 1524 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 RNA5SP72-201ENST00000364442 117 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 Y_RNA.256-201ENST00000364594 104 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 RNA5SP189-201ENST00000364920 115 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 Y_RNA.390-201ENST00000383932 102 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-114P-201ENST00000384704 105 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 MIR181A1-201ENST00000385026 110 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-780P-201ENST00000391030 104 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 BTF3P7-201ENST00000407097 488 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 RPS3AP24-201ENST00000407896 734 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 SPA17P1-201ENST00000416656 452 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 CCDC58P2-201ENST00000417131 366 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 MTND1P2-201ENST00000430604 821 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 Z99127.3-201ENST00000448158 395 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AP1S2P1-201ENST00000457344 379 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 SNORD121B-201ENST00000458838 81 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 FCF1P3-201ENST00000496394 590 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 PRDX4P1-201ENST00000507189 574 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC004062.1-201ENST00000509926 645 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC023141.12-201ENST00000512399 199 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-528P-201ENST00000516926 100 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC022616.6-201ENST00000520479 119 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms