Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC011979.2-201ENST00000527568 352 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AP005205.1-201ENST00000563503 508 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC055876.1-202ENST00000567053 138 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 MIR3913-1-201ENST00000577744 102 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 ZNF415P1-201ENST00000582279 1166 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC106900.2-201ENST00000604994 317 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AP000860.1-201ENST00000605250 559 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 NDUFA8P1-201ENST00000605525 367 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 RNU1-30P-201ENST00000606575 163 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC098614.4-201ENST00000607601 462 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC008498.1-201ENST00000613012 531 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AC004696.1-201ENST00000614345 607 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 SDR42E1P2-201ENST00000614861 481 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 AL732618.1-201ENST00000623251 301 ntBASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SLC6A13Q9NSD5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SLC6A13Q9NSD5 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SLC6A13Q9NSD5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SLC6A13Q9NSD5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SLC6A13Q9NSD5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 U3.11-201ENST00000364476 212 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 RNA5SP283-201ENST00000365604 119 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 RNU1-39P-201ENST00000383897 165 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 RNU6-1042P-201ENST00000384204 107 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AL359634.1-202ENST00000404721 284 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 YPEL5P1-201ENST00000419731 367 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC018630.2-202ENST00000422992 927 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 ISCA1P6-201ENST00000427740 390 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 RPL7L1P10-201ENST00000427790 463 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 USP9YP14-201ENST00000430663 563 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC104850.1-201ENST00000435940 476 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 ARPC3P1-201ENST00000437218 533 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC140076.1-201ENST00000449897 361 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC010631.1-201ENST00000474150 156 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 RPS27AP1-201ENST00000475545 471 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 HMGB3P15-201ENST00000507326 574 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 PCBP2P3-201ENST00000509726 843 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC114797.1-201ENST00000514003 728 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 Vault.3-201ENST00000516676 95 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AP006245.1-201ENST00000522549 120 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 FAM60DP-201ENST00000524174 632 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 OR8R1P-201ENST00000543943 764 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 RPL23AP84-201ENST00000571193 464 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC005951.2-201ENST00000576282 495 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC087499.8-201ENST00000578406 226 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC093227.2-201ENST00000589357 285 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC103710.2-201ENST00000609912 942 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC091834.1-201ENST00000614543 472 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 AC072046.2-201ENST00000618366 268 ntBASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SLC6A13Q9NSD5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 RNU6-511P-201ENST00000363496 107 ntBASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 MIR514A1-201ENST00000385133 98 ntBASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 MIR134-201ENST00000385258 73 ntBASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 RPS3AP36-201ENST00000398190 775 ntBASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 RNU6-195P-201ENST00000411352 109 ntBASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 AC127391.1-201ENST00000411737 98 ntBASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 MTCO3P41-201ENST00000414801 328 ntBASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 MTND3P17-201ENST00000416968 344 ntBASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 ELOCP4-201ENST00000420090 333 ntBASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC6A13Q9NSD5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms