Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AL079343.1-201ENST00000572358 1771 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 AL356473.1-201ENST00000406203 1408 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.54□□□□□ -2
CTPS2Q9NRF8 RNU6-28P-201ENST00000362378 107 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 RNU6-343P-201ENST00000364709 104 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 Y_RNA.465-201ENST00000384293 102 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 RNU6-952P-201ENST00000391164 108 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 TPMTP2-201ENST00000414372 726 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC106883.1-201ENST00000418805 562 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 USP9YP24-201ENST00000434374 697 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 MTND4P6-201ENST00000438297 472 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 LSM1P1-201ENST00000438629 273 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AL513043.1-201ENST00000439124 535 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 SDCBPP1-201ENST00000440192 890 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 USP9YP17-201ENST00000444617 696 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 RPL21P134-201ENST00000453468 483 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC097493.1-201ENST00000463958 372 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.54□□□□□ -2
CTPS2Q9NRF8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC006445.2-201ENST00000510061 472 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AL359273.1-201ENST00000510918 627 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC079395.1-201ENST00000510981 262 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC116353.3-201ENST00000511215 249 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC128657.1-201ENST00000549459 145 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 MIR3921-201ENST00000577308 85 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CTPS2Q9NRF8 MIR3609-201ENST00000582661 80 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 MTCO2P2-201ENST00000591258 225 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC020895.1-201ENST00000595362 272 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AP000254.1-201ENST00000609934 520 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AL596245.1-201ENST00000618994 362 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC109809.1-201ENST00000619665 545 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC011330.2-201ENST00000621680 635 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 AC006378.2-201ENST00000623178 2476 ntBASIC2.54□□□□□ -2
CTPS2Q9NRF8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CTPS2Q9NRF8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CTPS2Q9NRF8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.54□□□□□ -2
CTPS2Q9NRF8 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CTPS2Q9NRF8 FRG1BP-201ENST00000278882 761 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CTPS2Q9NRF8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CTPS2Q9NRF8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 RNU6-621P-201ENST00000364752 109 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 Y_RNA.311-201ENST00000365068 96 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.53□□□□□ -2
CTPS2Q9NRF8 Y_RNA.548-201ENST00000384656 105 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 RNU6-906P-201ENST00000384700 70 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 RNU6-1197P-201ENST00000391183 107 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 MTCO2P5-201ENST00000422621 426 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 HMGN2P30-201ENST00000423237 256 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 RPL36AP6-201ENST00000435770 321 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 AL592447.1-201ENST00000447592 540 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 SNRPGP6-201ENST00000451124 220 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 BX322784.1-201ENST00000455793 1077 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 RPL31P60-201ENST00000478450 367 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 AC109464.2-201ENST00000510242 943 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 AC109445.1-201ENST00000512356 383 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 AC017037.2-201ENST00000513850 890 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 RNU6-150P-201ENST00000516237 95 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 DEFB131D-201ENST00000526803 184 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 AP000867.2-201ENST00000532468 320 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 OR7K1P-201ENST00000546439 926 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 AL132857.1-201ENST00000555180 708 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 CYCSP39-201ENST00000565821 309 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 MIR3605-201ENST00000583214 100 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 AC105224.1-201ENST00000587055 421 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.53□□□□□ -2
CTPS2Q9NRF8 RPL12P50-201ENST00000603116 116 ntBASIC2.53□□□□□ -2
CTPS2Q9NRF8 RPP40P2-201ENST00000603596 712 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms