Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 HMGN2P38-201ENST00000423806 265 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 ZYG11AP1-201ENST00000430329 837 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AC009296.1-201ENST00000443146 155 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 HSFY3P-201ENST00000444242 1191 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AL031659.1-201ENST00000447075 539 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 RNA5SP458-201ENST00000516188 119 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 HSPE1P18-201ENST00000517602 280 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 CBX3P2-202ENST00000583365 535 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AC055876.5-201ENST00000605667 259 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 AL354685.2-201ENST00000448218 1447 ntBASIC1.68□□□□□ -2.14
KIAA1549Q9HCM3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 RNU4-23P-201ENST00000362839 140 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 Y_RNA.493-201ENST00000384422 102 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 MTND1P23-201ENST00000416931 372 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC068135.1-201ENST00000446164 246 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 RPL23AP63-201ENST00000498752 471 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 RNU6-760P-201ENST00000516078 97 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 RPAP2P1-201ENST00000603626 1168 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AL136363.1-201ENST00000605349 337 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 SNHG22-203ENST00000617833 660 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 MIR493-201ENST00000385254 89 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC073264.1-201ENST00000411508 416 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AL133384.1-201ENST00000412744 351 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 MORF4L1P7-201ENST00000426038 703 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AL121578.1-201ENST00000428051 892 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 Z85994.2-201ENST00000434327 452 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 RNA5SP310-201ENST00000459084 116 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 HMGB1P1-201ENST00000522557 636 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 EEF1B2P4-201ENST00000551398 348 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC010928.2-201ENST00000588017 287 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AP001330.4-201ENST00000604350 154 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 DPRXP5-201ENST00000604662 539 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC018618.2-201ENST00000604770 446 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC242628.1-201ENST00000606810 391 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 MIR6895-201ENST00000613497 78 ntBASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.67□□□□□ -2.14
KIAA1549Q9HCM3 OR4G2P-202ENST00000641004 1759 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 RNU6-457P-201ENST00000363999 107 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 SNORA67.1-201ENST00000364749 141 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 RNU6-730P-201ENST00000383954 104 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 RPS15AP38-201ENST00000413110 372 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 HMGB3P31-201ENST00000413333 595 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 RPL17P12-201ENST00000413391 526 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 AC098614.2-201ENST00000426040 255 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 EZH2P1-201ENST00000431167 291 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 FABP5P3-201ENST00000437960 408 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 RPL23AP58-201ENST00000440453 469 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 RPPH1-2P-201ENST00000516688 293 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 BTF3P12-201ENST00000519620 469 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 AC044913.1-201ENST00000557200 430 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 AC092474.3-201ENST00000603022 568 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 MIR6840-201ENST00000611937 71 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 AL353997.5-201ENST00000618886 171 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 SDAD1P2-201ENST00000441308 2028 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 AP005901.5-201ENST00000545779 1796 ntBASIC1.66□□□□□ -2.14
KIAA1549Q9HCM3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 UBE2L2-201ENST00000254302 429 ntBASIC1.65□□□□□ -2.14
KIAA1549Q9HCM3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms