Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 RNU4-73P-201ENST00000363164 141 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 RNU6-1249P-201ENST00000363237 111 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 RNU6-960P-201ENST00000364056 120 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 RNA5SP175-201ENST00000364275 119 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 SNORA70C-201ENST00000384538 135 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 Y_RNA.529-201ENST00000384586 119 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AL136372.1-201ENST00000403060 228 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AL162578.1-201ENST00000406202 378 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AL356387.2-201ENST00000422272 243 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 RPL35AP12-201ENST00000425362 338 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 MTND1P14-201ENST00000427400 950 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AL359073.1-201ENST00000448036 403 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 MTND1P18-201ENST00000448191 573 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 MTND3P16-201ENST00000452205 344 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 MRPS17P3-201ENST00000465453 385 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC034236.1-201ENST00000469891 373 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC004062.1-201ENST00000509926 645 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 RNU6-1095P-201ENST00000516148 108 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 RN7SKP219-201ENST00000516825 296 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC090281.1-201ENST00000523019 276 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC022690.1-201ENST00000526681 550 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 MIR3939-201ENST00000582614 106 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC012669.1-201ENST00000603209 283 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC010680.4-201ENST00000605334 543 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 RNU4-89P-201ENST00000607443 133 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AL121757.2-201ENST00000611223 313 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC010133.1-201ENST00000615809 842 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC103858.2-201ENST00000621471 543 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC112487.2-201ENST00000637950 304 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 ASNSP3-201ENST00000451989 1306 ntBASIC3.95□□□□□ -1.78
AMBRA1Q9C0C7 AC244517.1-201ENST00000606030 2086 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 SNORA62.1-201ENST00000364287 154 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 SNORD81.2-201ENST00000365153 76 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 RNU6-356P-201ENST00000384140 107 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 Y_RNA.509-201ENST00000384506 99 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 SNORD37.1-201ENST00000390968 65 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 RNU4-65P-201ENST00000410473 140 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 EEF1A1P40-201ENST00000412883 573 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 UBE2FP1-201ENST00000416536 447 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 PDCL2P1-201ENST00000419302 352 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 DUTP6-201ENST00000425573 462 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AC008850.1-201ENST00000427546 362 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AC011742.1-201ENST00000431448 434 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AL132765.1-201ENST00000434165 553 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 RPL7P12-201ENST00000446719 750 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 RPL21P126-201ENST00000470049 478 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 FGF7P4-201ENST00000509595 295 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AC100870.1-201ENST00000522035 505 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 OR5B10P-201ENST00000532869 642 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 BNIP3P6-201ENST00000549284 499 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 IGHV3-29-201ENST00000604817 344 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AC099669.2-201ENST00000616549 437 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AC008013.2-202ENST00000637965 364 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AL139811.1-201ENST00000424779 2299 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 FAM35DP-201ENST00000323387 2712 ntBASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.94□□□□□ -1.78
AMBRA1Q9C0C7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms