Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC125611.2-201ENST00000551907 647 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC007954.1-201ENST00000554198 494 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 MIR4506-201ENST00000584693 77 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 BDH2P1-201ENST00000602288 736 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC106900.2-201ENST00000604994 317 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 U1.23-201ENST00000610293 146 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 RNU1-68P-201ENST00000615382 146 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 U1.39-201ENST00000621562 146 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AP000676.3-201ENST00000623299 569 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC092192.1-201ENST00000633154 1018 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC099063.3-201ENST00000642066 185 ntBASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.09□□□□□ -1.91
CCM2Q9BSQ5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCM2Q9BSQ5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.09□□□□□ -1.92
CCM2Q9BSQ5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.09□□□□□ -1.92
CCM2Q9BSQ5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.09□□□□□ -1.92
CCM2Q9BSQ5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC092435.3-201ENST00000565538 3654 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 RNA5SP387-201ENST00000364226 106 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 MIR1305-201ENST00000408300 86 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AL512649.1-201ENST00000428997 581 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 RPL7P34-201ENST00000433316 712 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 UBE2D3P1-201ENST00000436669 444 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC098826.2-201ENST00000452011 651 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 ART2BP-201ENST00000453501 499 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 RPS23P3-201ENST00000470993 430 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC068587.2-201ENST00000478386 781 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC105914.1-201ENST00000511798 226 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 MRPS33P3-201ENST00000513456 322 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC022483.1-201ENST00000514020 567 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AP001804.3-201ENST00000525146 880 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 MTATP6P15-201ENST00000527233 835 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC010653.1-201ENST00000571108 881 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 UBL5P2-201ENST00000583788 219 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC090616.2-202ENST00000584248 222 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC012493.2-201ENST00000595083 291 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 PRELID3BP8-201ENST00000604148 295 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC100793.4-201ENST00000613683 429 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC099506.2-201ENST00000623074 221 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AC090617.7-201ENST00000623952 126 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 PCMTD1P7-201ENST00000634506 357 ntBASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCM2Q9BSQ5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 U3.20-201ENST00000390909 217 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AC110754.1-201ENST00000399740 601 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 RPL7P25-201ENST00000404151 721 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 RNU4-65P-201ENST00000410473 140 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AL445669.1-201ENST00000426743 755 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AC104332.2-201ENST00000429959 156 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 RSU1P2-202ENST00000437884 485 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 FAM103A2P-201ENST00000444122 354 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AL592447.1-201ENST00000447592 540 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 RPL36AP33-201ENST00000450395 310 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AC068724.1-201ENST00000487100 792 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 ARL4AP2-201ENST00000507378 601 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 RN7SKP57-201ENST00000517248 293 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AC245166.1-201ENST00000521012 253 ntBASIC3.07□□□□□ -1.92
CCM2Q9BSQ5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms