Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC010374.2-201ENST00000512933 535 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 OR8K4P-201ENST00000534608 872 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 UBE2L4-201ENST00000587688 464 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AL592148.2-201ENST00000612210 372 ntBASIC1.4□□□□□ -2.19
VPS25Q9BRG1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
VPS25Q9BRG1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 MTND5P1-201ENST00000445440 1375 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 MIR649-201ENST00000384843 97 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 MIR323B-201ENST00000385269 82 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 MIR934-201ENST00000401241 83 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 RNU2-17P-201ENST00000410290 190 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 RNA5SP450-201ENST00000411206 102 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 VN1R36P-201ENST00000414936 291 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AL512661.1-201ENST00000434586 1253 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 OR10R1P-201ENST00000441524 1141 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 RAC1P7-201ENST00000445367 377 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AC068135.1-201ENST00000446164 246 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AL592447.1-201ENST00000447592 540 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 PRSS3P4-201ENST00000453323 162 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AC008526.1-201ENST00000509149 338 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AC109464.2-201ENST00000510242 943 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AC008834.1-201ENST00000511612 175 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 RN7SKP157-201ENST00000516174 282 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 MIR5002-201ENST00000584713 97 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 HMGN2P15-201ENST00000585707 270 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 NRBF2P1-201ENST00000587407 859 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 MIR378J-201ENST00000611988 109 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AC010678.1-201ENST00000614118 713 ntBASIC1.39□□□□□ -2.19
VPS25Q9BRG1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
VPS25Q9BRG1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AC009487.4-201ENST00000624969 3585 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AC131280.1-202ENST00000624067 4211 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 CISD1P1-201ENST00000393907 327 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AC068050.1-201ENST00000394891 380 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 HMGN2P39-201ENST00000398005 273 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 VN1R51P-201ENST00000411675 945 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AC023141.4-201ENST00000412031 328 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 HMGB1P11-201ENST00000413899 637 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 USP9YP15-201ENST00000442391 422 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AC009220.1-201ENST00000451614 275 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 RPL12P25-201ENST00000455592 494 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 PABPC1P3-201ENST00000469174 459 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 WBP1LP4-201ENST00000505043 344 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 RN7SKP24-201ENST00000515888 284 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 SCARNA16.3-201ENST00000516595 184 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 RNA5SP137-201ENST00000516833 135 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 DUXAP2-201ENST00000519198 589 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AC021269.2-201ENST00000532318 330 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AC013553.2-201ENST00000604244 589 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AC092608.2-201ENST00000624427 218 ntBASIC1.38□□□□□ -2.19
VPS25Q9BRG1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.38□□□□□ -2.19
VPS25Q9BRG1 AC025263.3-201ENST00000622965 1396 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 RNU6-859P-201ENST00000362728 107 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 RNU6-152P-201ENST00000384037 107 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 RNU6-921P-201ENST00000384361 107 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 MIR141-201ENST00000384975 95 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 MIR325-201ENST00000385260 98 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AC016769.3-201ENST00000396562 315 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AL589655.1-201ENST00000405398 482 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AL024507.1-201ENST00000412741 274 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AC005005.2-201ENST00000420779 380 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS25Q9BRG1 ARL5AP4-201ENST00000430731 512 ntBASIC1.37□□□□□ -2.19
VPS25Q9BRG1 FCF1P1-201ENST00000432690 571 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms