Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RN7SKP200-201ENST00000410564 320 ntBASIC1.19□□□□□ -2.22
COL12A1Q99715 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.19□□□□□ -2.22
COL12A1Q99715 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.19□□□□□ -2.22
COL12A1Q99715 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.19□□□□□ -2.22
COL12A1Q99715 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.19□□□□□ -2.22
COL12A1Q99715 AP005435.4-201ENST00000529514 284 ntBASIC1.19□□□□□ -2.22
COL12A1Q99715 AL138955.1-201ENST00000622881 1040 ntBASIC1.19□□□□□ -2.22
COL12A1Q99715 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.19□□□□□ -2.22
COL12A1Q99715 OR10R1P-201ENST00000441524 1141 ntBASIC1.19□□□□□ -2.22
COL12A1Q99715 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.19□□□□□ -2.22
COL12A1Q99715 AC036111.3-201ENST00000526389 112 ntBASIC1.19□□□□□ -2.22
COL12A1Q99715 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.19□□□□□ -2.22
COL12A1Q99715 OR8X1P-201ENST00000534542 869 ntBASIC1.19□□□□□ -2.22
COL12A1Q99715 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.19□□□□□ -2.22
COL12A1Q99715 AP001029.3-201ENST00000588063 596 ntBASIC1.19□□□□□ -2.22
COL12A1Q99715 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COL12A1Q99715 MIR758-201ENST00000390227 88 ntBASIC1.19□□□□□ -2.22
COL12A1Q99715 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL12A1Q99715 RPL7P53-201ENST00000421245 739 ntBASIC1.19□□□□□ -2.22
COL12A1Q99715 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.19□□□□□ -2.22
COL12A1Q99715 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.19□□□□□ -2.22
COL12A1Q99715 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.19□□□□□ -2.22
COL12A1Q99715 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL12A1Q99715 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.19□□□□□ -2.22
COL12A1Q99715 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COL12A1Q99715 uc_338.12-201ENST00000616344 181 ntBASIC1.19□□□□□ -2.22
COL12A1Q99715 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 RNA5SP354-201ENST00000391247 136 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 AC114973.1-201ENST00000429057 632 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 AC090774.1-201ENST00000435925 246 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.18□□□□□ -2.22
COL12A1Q99715 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.18□□□□□ -2.22
COL12A1Q99715 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.18□□□□□ -2.22
COL12A1Q99715 RNU1-78P-201ENST00000391248 165 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 HMGN2P38-201ENST00000423806 265 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 WARS2P1-201ENST00000429678 537 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.18□□□□□ -2.22
COL12A1Q99715 AP000926.1-201ENST00000479573 241 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.18□□□□□ -2.22
COL12A1Q99715 MTND5P10-201ENST00000603719 1809 ntBASIC1.18□□□□□ -2.22
COL12A1Q99715 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
COL12A1Q99715 RNU1-133P-201ENST00000364867 167 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 Y_RNA.390-201ENST00000383932 102 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 CYCSP33-201ENST00000414485 327 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 SEC63P1-201ENST00000425785 1258 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AC108059.3-201ENST00000456388 214 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AC110792.2-201ENST00000510278 224 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 VTA1P2-201ENST00000520205 911 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 HSPE1P3-201ENST00000559254 309 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AC013553.2-201ENST00000604244 589 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AC011890.2-201ENST00000613393 294 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AC007342.9-201ENST00000623877 1385 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AL359851.1-201ENST00000569460 4997 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.17□□□□□ -2.22
COL12A1Q99715 CFTRP1-201ENST00000456646 183 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AC089999.1-201ENST00000460336 374 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AC092902.1-201ENST00000486999 259 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.17□□□□□ -2.22
COL12A1Q99715 RNU1-92P-201ENST00000517017 135 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 RNA5SP127-201ENST00000411051 133 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AC007390.1-201ENST00000415722 356 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.17□□□□□ -2.22
COL12A1Q99715 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.17□□□□□ -2.22
COL12A1Q99715 RNA5SP330-201ENST00000517096 96 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.17□□□□□ -2.22
COL12A1Q99715 AL049838.1-201ENST00000563647 981 ntBASIC1.17□□□□□ -2.22
COL12A1Q99715 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.17□□□□□ -2.22
COL12A1Q99715 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.16□□□□□ -2.22
COL12A1Q99715 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.16□□□□□ -2.22
COL12A1Q99715 RPL17P12-201ENST00000413391 526 ntBASIC1.16□□□□□ -2.22
COL12A1Q99715 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.16□□□□□ -2.22
COL12A1Q99715 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.16□□□□□ -2.22
COL12A1Q99715 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.16□□□□□ -2.22
COL12A1Q99715 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
COL12A1Q99715 AC104115.2-201ENST00000523026 687 ntBASIC1.16□□□□□ -2.22
COL12A1Q99715 AP003033.1-201ENST00000527244 415 ntBASIC1.16□□□□□ -2.22
COL12A1Q99715 MIR3935-201ENST00000583472 104 ntBASIC1.16□□□□□ -2.22
COL12A1Q99715 RNU6-198P-201ENST00000384258 104 ntBASIC1.16□□□□□ -2.22
COL12A1Q99715 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.16□□□□□ -2.22
COL12A1Q99715 USP9YP7-201ENST00000436723 430 ntBASIC1.16□□□□□ -2.22
COL12A1Q99715 AL445687.1-201ENST00000439946 251 ntBASIC1.16□□□□□ -2.22
COL12A1Q99715 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.16□□□□□ -2.22
COL12A1Q99715 USP9YP32-201ENST00000452432 430 ntBASIC1.16□□□□□ -2.22
COL12A1Q99715 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.16□□□□□ -2.22
COL12A1Q99715 AC139103.1-201ENST00000534696 1030 ntBASIC1.16□□□□□ -2.22
COL12A1Q99715 RNF6P1-201ENST00000444889 1784 ntBASIC1.16□□□□□ -2.22
COL12A1Q99715 AP001486.2-201ENST00000561652 5113 ntBASIC1.15□□□□□ -2.22
COL12A1Q99715 VTRNA1-1-201ENST00000363120 99 ntBASIC1.15□□□□□ -2.22
COL12A1Q99715 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.15□□□□□ -2.22
COL12A1Q99715 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.15□□□□□ -2.22
COL12A1Q99715 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.15□□□□□ -2.23
COL12A1Q99715 SNRPEP2-201ENST00000397592 279 ntBASIC1.15□□□□□ -2.23
COL12A1Q99715 AL031659.1-201ENST00000447075 539 ntBASIC1.15□□□□□ -2.23
COL12A1Q99715 AL353718.1-201ENST00000451028 517 ntBASIC1.15□□□□□ -2.23
COL12A1Q99715 AC107032.1-201ENST00000485945 480 ntBASIC1.15□□□□□ -2.23
COL12A1Q99715 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.15□□□□□ -2.23
COL12A1Q99715 Y_RNA.675-201ENST00000516389 149 ntBASIC1.15□□□□□ -2.23
COL12A1Q99715 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms