Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.13□□□□□ -1.91
DUX3Q96PT4 MIR3146-201ENST00000580367 79 ntBASIC3.13□□□□□ -1.91
DUX3Q96PT4 AC006130.2-201ENST00000586202 326 ntBASIC3.13□□□□□ -1.91
DUX3Q96PT4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.13□□□□□ -1.91
DUX3Q96PT4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.13□□□□□ -1.91
DUX3Q96PT4 AC007621.1-201ENST00000604544 437 ntBASIC3.13□□□□□ -1.91
DUX3Q96PT4 AP001330.5-201ENST00000607176 411 ntBASIC3.13□□□□□ -1.91
DUX3Q96PT4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.13□□□□□ -1.91
DUX3Q96PT4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.13□□□□□ -1.91
DUX3Q96PT4 YWHAEP7-203ENST00000622054 312 ntBASIC3.13□□□□□ -1.91
DUX3Q96PT4 AC008785.1-201ENST00000624475 456 ntBASIC3.13□□□□□ -1.91
DUX3Q96PT4 AL359697.1-201ENST00000624879 587 ntBASIC3.13□□□□□ -1.91
DUX3Q96PT4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.13□□□□□ -1.91
DUX3Q96PT4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
DUX3Q96PT4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DUX3Q96PT4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DUX3Q96PT4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.13□□□□□ -1.91
DUX3Q96PT4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DUX3Q96PT4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DUX3Q96PT4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
DUX3Q96PT4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DUX3Q96PT4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DUX3Q96PT4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DUX3Q96PT4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DUX3Q96PT4 CBX3P1-201ENST00000325243 554 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 RNU6-451P-201ENST00000362921 107 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 SNORD56.2-201ENST00000363242 71 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 SNORA62.3-201ENST00000365110 153 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
DUX3Q96PT4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DUX3Q96PT4 SNORA69-201ENST00000383895 132 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 RNU1-39P-201ENST00000383897 165 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 Y_RNA.529-201ENST00000384586 119 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DUX3Q96PT4 RPS4XP8-201ENST00000402039 771 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 RNU2-47P-201ENST00000410649 186 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 RNU2-15P-201ENST00000410692 191 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 RNU2-41P-201ENST00000410991 178 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 OR51AB1P-201ENST00000429046 620 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 CACYBPP2-201ENST00000453625 678 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 UBDP1-202ENST00000457888 382 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC233702.1-201ENST00000482905 502 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 RPL39P36-201ENST00000490784 156 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 CENPUP1-201ENST00000526649 1202 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 AL359212.1-201ENST00000556608 614 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC053481.3-201ENST00000577881 843 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 MIR5047-201ENST00000579212 100 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 UBE2V2P2-201ENST00000587677 504 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC064801.1-201ENST00000612025 407 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DUX3Q96PT4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 MIR7702-201ENST00000621931 59 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC091925.2-201ENST00000625059 256 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.12□□□□□ -1.91
DUX3Q96PT4 AC006026.1-201ENST00000444025 1803 ntBASIC3.12□□□□□ -1.91
DUX3Q96PT4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DUX3Q96PT4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DUX3Q96PT4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
DUX3Q96PT4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DUX3Q96PT4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.11□□□□□ -1.91
DUX3Q96PT4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DUX3Q96PT4 AC092447.10-201ENST00000620607 1652 ntBASIC3.11□□□□□ -1.91
DUX3Q96PT4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
DUX3Q96PT4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DUX3Q96PT4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DUX3Q96PT4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
DUX3Q96PT4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DUX3Q96PT4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.11□□□□□ -1.91
DUX3Q96PT4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DUX3Q96PT4 RNU6-97P-201ENST00000363387 104 ntBASIC3.11□□□□□ -1.91
DUX3Q96PT4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.11□□□□□ -1.91
DUX3Q96PT4 RNU6-263P-201ENST00000363811 107 ntBASIC3.11□□□□□ -1.91
DUX3Q96PT4 Y_RNA.356-201ENST00000365475 113 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms