Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 EIF4BP1-201ENST00000554881 351 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AL049838.1-201ENST00000563647 981 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 MIR3609-201ENST00000582661 80 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC068313.1-201ENST00000604028 1008 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC011458.1-201ENST00000604034 617 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC144521.1-201ENST00000607148 956 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC090132.2-201ENST00000615881 347 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC008443.7-201ENST00000622195 246 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC090617.7-201ENST00000623952 126 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC006386.2-201ENST00000624491 75 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC012005.1-201ENST00000624575 75 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AC079228.1-201ENST00000624774 1049 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AL159972.1-201ENST00000625150 448 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 AL137790.1-201ENST00000634283 177 ntBASIC3.12□□□□□ -1.91
ZNF560Q96MR9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ZNF560Q96MR9 TPTE2P4-201ENST00000258589 1605 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 RNU6-744P-201ENST00000365557 107 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 RNU6-637P-201ENST00000384050 107 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 RNU6-1316P-201ENST00000384242 108 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 MTND1P21-201ENST00000412991 285 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 RPS20P5-201ENST00000434808 360 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 PAXBP1P1-201ENST00000449315 447 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 NIPA2P5-201ENST00000452282 464 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC104472.2-201ENST00000469035 601 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 GTF2IP9-201ENST00000502460 301 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC106782.4-201ENST00000568264 210 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 VN1R82P-201ENST00000601481 356 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC024153.1-201ENST00000603103 365 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC009268.2-201ENST00000621925 457 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AC006927.4-201ENST00000639187 543 ntBASIC3.11□□□□□ -1.91
ZNF560Q96MR9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.11□□□□□ -1.91
ZNF560Q96MR9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 RNU6-462P-201ENST00000362659 105 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 RNU6-289P-201ENST00000364093 107 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 RNA5SP252-201ENST00000391131 119 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 U3.26-201ENST00000391236 204 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 RPL21P3-201ENST00000395517 478 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AL645937.1-202ENST00000421799 937 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AL590383.1-201ENST00000428602 75 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 TXNL1P1-201ENST00000429528 554 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC092573.2-201ENST00000434546 243 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 TAAR7P-201ENST00000436141 242 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AL831737.1-201ENST00000441288 271 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC112653.1-201ENST00000443851 386 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC009237.8-201ENST00000445492 379 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 MTCO1P27-201ENST00000448269 226 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC146507.2-201ENST00000460608 476 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 HMGB1P36-201ENST00000487709 576 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 TPT1P8-201ENST00000510120 555 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 SCARNA15.2-201ENST00000516409 127 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 OR7K1P-201ENST00000546439 926 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 DNAJC8P1-201ENST00000554535 372 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.1□□□□□ -1.91
ZNF560Q96MR9 MTND4P33-201ENST00000556706 766 ntBASIC3.1□□□□□ -1.91
ZNF560Q96MR9 HMGB1P14-201ENST00000557424 591 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms