Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC007318.2-201ENST00000620999 243 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC022079.1-201ENST00000621546 602 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AC019226.2-201ENST00000625973 424 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC00477Q96M19 AL049780.3-201ENST00000624612 1583 ntBASIC2.22□□□□□ -2.05
LINC00477Q96M19 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 GDI2P1-201ENST00000429312 1336 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00477Q96M19 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 RPL9P7-201ENST00000330965 580 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00477Q96M19 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00477Q96M19 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00477Q96M19 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 RNU1-35P-201ENST00000362782 153 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 VTRNA1-1-201ENST00000363120 99 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 RNU6-660P-201ENST00000364566 109 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 RNU6-1074P-201ENST00000383995 104 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 SNORD51-201ENST00000384320 80 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 MIR135A2-201ENST00000384854 100 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00477Q96M19 TMSB4XP8-201ENST00000402089 135 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 TMSB4XP6-201ENST00000415187 135 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 TMSB4XP1-201ENST00000424567 135 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC005300.1-201ENST00000428401 373 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 EZH2P1-201ENST00000431167 291 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 LARP1BP3-201ENST00000437229 869 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 RSU1P2-202ENST00000437884 485 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 RSL24D1P3-201ENST00000449255 495 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 RPL21P41-201ENST00000459863 264 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC091153.1-201ENST00000466297 402 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 RPL27AP5-201ENST00000469428 449 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC034236.1-201ENST00000469891 373 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC068587.2-201ENST00000478386 781 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 RNU6-759P-201ENST00000516740 103 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 RN7SKP40-201ENST00000517211 242 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC105185.1-201ENST00000518705 535 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 MTCO1P47-201ENST00000523889 1271 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC023050.2-201ENST00000544968 387 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC053481.3-201ENST00000577881 843 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC072039.2-201ENST00000608883 439 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AL445264.1-201ENST00000621719 171 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AL356596.1-201ENST00000624230 379 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC007490.1-201ENST00000624321 703 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 MTND4P16-201ENST00000466108 1367 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC135776.4-201ENST00000624300 1904 ntBASIC2.21□□□□□ -2.06
LINC00477Q96M19 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC00477Q96M19 AC006378.2-201ENST00000623178 2476 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC073325.2-201ENST00000339545 159 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 SNORA63.1-201ENST00000362493 131 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 RNU6-931P-201ENST00000363850 107 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 SNORA71.1-201ENST00000364523 117 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LINC00477Q96M19 RNU6-851P-201ENST00000384565 107 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 HMGB1P17-201ENST00000403495 628 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 USP9YP26-201ENST00000421008 661 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 MTCYBP3-201ENST00000445588 1137 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 MTCO1P27-201ENST00000448269 226 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AL162389.1-201ENST00000449233 177 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC234775.1-201ENST00000454247 670 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 Z82190.1-201ENST00000454534 490 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms