Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RPL32P34-201ENST00000486380 400 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 GMPSP1-201ENST00000514075 579 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 RNU1-45P-201ENST00000517191 141 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AP004247.1-201ENST00000531556 1289 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 OR5B10P-201ENST00000532869 642 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC125611.2-201ENST00000551907 647 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 COX6CP3-201ENST00000580869 223 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 MIR4276-201ENST00000584832 70 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC083760.1-201ENST00000589621 670 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC106791.2-201ENST00000604680 391 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC097468.3-201ENST00000607956 456 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC063944.3-201ENST00000609969 533 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AL138880.2-201ENST00000616214 239 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AL607023.1-201ENST00000620045 248 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AL031667.3-201ENST00000620124 655 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 CR392039.5-201ENST00000623201 510 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AL356596.1-201ENST00000624230 379 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AL159972.1-201ENST00000625150 448 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 AC006378.2-201ENST00000623178 2476 ntBASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.46□□□□□ -2.02
RPUSD4Q96CM3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AP000568.1-201ENST00000282964 442 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 RNU6-223P-201ENST00000362830 107 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 SNORD56.5-201ENST00000364281 72 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 SNORA1.3-201ENST00000384676 136 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 RNU6-114P-201ENST00000384704 105 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 MIR1289-1-201ENST00000408836 144 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC018644.1-201ENST00000429934 551 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 MTND1P20-201ENST00000430341 950 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 RPL35AP22-201ENST00000436855 335 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 THAP5P1-201ENST00000439089 262 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AL133547.1-201ENST00000448546 220 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 ELOCP23-201ENST00000452014 332 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AP1S2P1-201ENST00000457344 379 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AIG1P1-201ENST00000503376 148 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC021678.1-201ENST00000505195 936 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 RNU6-678P-201ENST00000516832 109 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC022690.1-201ENST00000526681 550 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC106785.1-201ENST00000565935 262 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC138761.3-201ENST00000579993 334 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 ZNF415P1-201ENST00000582279 1166 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 MIR544B-201ENST00000582372 78 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AP001004.1-201ENST00000582468 324 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC093838.1-201ENST00000613014 469 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC013476.2-201ENST00000614456 459 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AC099063.3-201ENST00000642066 185 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AL138713.1-201ENST00000624026 2130 ntBASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.45□□□□□ -2.02
RPUSD4Q96CM3 AL161912.2-201ENST00000565707 3007 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 RNA5SP50-201ENST00000363731 107 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 RNU6-853P-201ENST00000364306 107 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 CD24P4-201ENST00000382840 243 ntBASIC2.44□□□□□ -2.02
RPUSD4Q96CM3 AL139095.1-201ENST00000404326 391 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms