Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RNU6-278P-201ENST00000390945 109 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 RNU6-248P-201ENST00000410720 107 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC007899.1-201ENST00000412776 775 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AL591419.1-201ENST00000427423 339 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 TIMM9P1-201ENST00000436122 256 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 USP9YP15-201ENST00000442391 422 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 VN1R34P-201ENST00000447387 883 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 RPL7P24-201ENST00000493052 752 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 Y_RNA.672-201ENST00000516289 104 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC022690.1-201ENST00000526681 550 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AL133153.1-201ENST00000557756 303 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC087683.1-201ENST00000591187 441 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC090578.1-201ENST00000604955 591 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC245517.5-201ENST00000611529 162 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC006338.1-201ENST00000618453 749 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 MIR4275-201ENST00000636486 87 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 CUL1P1-201ENST00000509510 2425 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 AC005832.2-201ENST00000538921 1430 ntBASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SH3KBP1Q96B97 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 MIR199A2-201ENST00000385289 110 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AL136372.1-201ENST00000403060 228 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC127391.1-201ENST00000411737 98 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 USP9YP36-201ENST00000424581 829 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AL445584.1-201ENST00000431451 330 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC090774.1-201ENST00000435925 246 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC073614.1-201ENST00000438690 650 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AL500522.2-201ENST00000448562 343 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 snoU13.22-201ENST00000459428 104 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC010587.1-201ENST00000505809 469 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 HMGN1P11-201ENST00000508668 303 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 RNU6-1231P-201ENST00000517185 103 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC022695.1-201ENST00000522089 237 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC022880.1-201ENST00000534017 973 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 BDH2P1-201ENST00000602288 736 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC146944.4-201ENST00000602697 718 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC008739.3-201ENST00000603262 127 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC024220.1-201ENST00000603675 484 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC004908.2-201ENST00000609090 574 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 Z99129.1-201ENST00000612510 255 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AL133173.2-201ENST00000614270 90 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AL603758.1-201ENST00000618654 241 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 ZNF826P-207ENST00000622273 1910 ntBASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SH3KBP1Q96B97 AL138713.1-201ENST00000624026 2130 ntBASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 RNU5A-8P-201ENST00000364102 114 ntBASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 RNA5SP387-201ENST00000364226 106 ntBASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 RNU1-39P-201ENST00000383897 165 ntBASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 Y_RNA.517-201ENST00000384551 106 ntBASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 C1DP2-201ENST00000418167 426 ntBASIC3.74□□□□□ -1.81
SH3KBP1Q96B97 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms