Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC010653.1-201ENST00000571108 881 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 AL355877.2-201ENST00000603670 358 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 AC112187.2-201ENST00000604345 283 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 AC105148.1-201ENST00000604961 409 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 AC019159.1-201ENST00000605094 187 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 AL109618.2-201ENST00000605527 211 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.05□□□□□ -1.92
PTP4A1Q93096 AC024560.3-201ENST00000608482 349 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.05□□□□□ -1.92
PTP4A1Q93096 AC008498.1-201ENST00000613012 531 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.05□□□□□ -1.92
PTP4A1Q93096 SNHG22-203ENST00000617833 660 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 AL034408.1-202ENST00000636088 415 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 AC009093.8-201ENST00000641769 292 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTP4A1Q93096 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.05□□□□□ -1.92
PTP4A1Q93096 AC017071.1-201ENST00000564407 2204 ntBASIC3.05□□□□□ -1.92
PTP4A1Q93096 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTP4A1Q93096 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTP4A1Q93096 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTP4A1Q93096 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTP4A1Q93096 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTP4A1Q93096 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 MIR888-201ENST00000401186 77 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AL008987.1-201ENST00000415528 237 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 USP9YP13-201ENST00000417797 480 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 ISCA1P2-201ENST00000438679 421 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC122718.1-201ENST00000439448 744 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 Z73417.1-201ENST00000447373 778 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC073387.1-201ENST00000453261 709 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC108059.3-201ENST00000456388 214 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 FAM133DP-201ENST00000464802 691 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AL672167.3-201ENST00000465951 960 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC020699.1-201ENST00000505161 445 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC021678.1-201ENST00000505195 936 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC104619.4-201ENST00000510773 249 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 RNU6-927P-201ENST00000516199 100 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC100870.1-201ENST00000522035 505 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AP000907.2-201ENST00000530827 353 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC013828.2-201ENST00000532487 235 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PTP4A1Q93096 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 MIR544B-201ENST00000582372 78 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 FTX_3.1-201ENST00000610451 147 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 AC026241.1-201ENST00000517873 2142 ntBASIC3.04□□□□□ -1.92
PTP4A1Q93096 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PTP4A1Q93096 ZNF833P-201ENST00000424938 1494 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTP4A1Q93096 RNA5SP124-201ENST00000362739 110 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 SNORA62.3-201ENST00000365110 153 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 MIR19A-201ENST00000384878 82 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 RPL5P18-201ENST00000406671 891 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 SYF2P2-201ENST00000417620 583 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 CYCSP4-201ENST00000429682 331 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.03□□□□□ -1.92
PTP4A1Q93096 HSPD1P21-201ENST00000436541 245 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 AL831737.1-201ENST00000441288 271 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 CYCSP35-201ENST00000451978 304 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 RPL26P9-201ENST00000457466 433 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.03□□□□□ -1.92
PTP4A1Q93096 RNU6-56P-201ENST00000516986 93 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.03□□□□□ -1.92
PTP4A1Q93096 AC087276.1-201ENST00000529659 480 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.03□□□□□ -1.92
PTP4A1Q93096 AL391261.3-201ENST00000557194 520 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.03□□□□□ -1.92
PTP4A1Q93096 AC090888.2-201ENST00000559765 1144 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 AC025281.1-201ENST00000567026 265 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 AL354943.1-201ENST00000572103 781 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.03□□□□□ -1.92
PTP4A1Q93096 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.03□□□□□ -1.92
PTP4A1Q93096 AC027449.1-201ENST00000608890 407 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 AP000240.1-201ENST00000609910 452 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.03□□□□□ -1.92
PTP4A1Q93096 AC073476.4-201ENST00000628409 72 ntBASIC3.03□□□□□ -1.92
PTP4A1Q93096 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PTP4A1Q93096 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PTP4A1Q93096 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PTP4A1Q93096 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 FTLP6-201ENST00000355274 422 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PTP4A1Q93096 Y_RNA.245-201ENST00000364493 95 ntBASIC3.02□□□□□ -1.93
PTP4A1Q93096 MIR218-2-201ENST00000385006 110 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms