Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNU6-405P-201ENST00000516637 110 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 AC022616.6-201ENST00000520479 119 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 AP003122.4-201ENST00000530980 758 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 AC126177.3-201ENST00000551839 688 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 AC146944.4-201ENST00000602697 718 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 AC078795.2-201ENST00000602835 1252 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 NDUFA8P1-201ENST00000605525 367 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 TUG1_1.1-201ENST00000610654 145 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 AC138932.5-201ENST00000617759 563 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 MIR6130-201ENST00000619419 109 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 AL392088.2-201ENST00000637607 285 ntBASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
SLC44A1Q8WWI5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 SNORA73.2-201ENST00000364946 201 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 MIR200C-201ENST00000384980 68 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 MIR591-201ENST00000385290 95 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 Z99755.1-201ENST00000414048 380 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC233728.2-201ENST00000425348 757 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 RPL23AP22-201ENST00000437556 453 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 VN1R34P-201ENST00000447387 883 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 TPT1P7-201ENST00000458300 517 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 RPL31P13-201ENST00000484151 370 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC055855.1-201ENST00000489563 579 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 RNU6-1073P-201ENST00000517182 106 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 RN7SKP289-201ENST00000517244 295 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC103783.1-201ENST00000520506 373 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AL157394.1-201ENST00000562983 1224 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AL356432.3-201ENST00000568952 465 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC012182.1-201ENST00000570133 895 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 MIR4528-201ENST00000577763 90 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 MIR4444-1-201ENST00000581696 74 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 MIR4444-2-201ENST00000584390 74 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 BNIP3P33-201ENST00000598912 569 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AP001429.1-201ENST00000602568 530 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 XIAPP1-201ENST00000603162 600 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC015871.2-201ENST00000603605 948 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 SNORA51-201ENST00000606420 132 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AL139286.2-201ENST00000606838 396 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 RNU6-87P-201ENST00000607561 108 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AL355472.4-201ENST00000610233 626 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AL589743.7-201ENST00000612637 233 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC008250.2-201ENST00000615261 205 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC009268.2-201ENST00000621925 457 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AL353748.2-201ENST00000622148 471 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AL359740.1-201ENST00000624340 592 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC048347.1-201ENST00000624621 427 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC244258.1-201ENST00000637553 1071 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AL079305.1-201ENST00000623159 3008 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AL138713.1-201ENST00000624026 2130 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SLC44A1Q8WWI5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 RNU6-1078P-201ENST00000364522 103 ntBASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 SNORA51.2-201ENST00000364595 132 ntBASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 HSPE1P26-201ENST00000405341 275 ntBASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 FCF1P10-201ENST00000407590 479 ntBASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 RAD23BP2-201ENST00000416003 1207 ntBASIC3.43□□□□□ -1.86
SLC44A1Q8WWI5 MTCO3P12-201ENST00000416718 547 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms